Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0700 ATGGCCGCAAAAATAATTAGTAGCTCCGTCACATCCGTCCTCTCCGACGTTGACACCACCCCGGTTCCTGGGAACAAATCCCAACTTGCCAAATGGTTCAACGACACAGTAGGGCCATTATCACAACGAATGAATAGCCTTGACCCTGCACTTGCAGTTGTAGAGAAGGGAGCATATGTAGTGAAGGTAATGCAAGATGGGAATGGAAATTTCAAGACAGTCAAAGATGCCATTAACAGCATCCCAAGCGGGAACACAGAGCGTGTGATTGTGTACATTGGAGGTGGGACTAACACTGAAAAATCAAGATTGATAAGACAAAGCCTTTTGTGA 333 0.4565 MAAKIISSSVTSVLSDVDTTPVPGNKSQLAKWFNDTVGPLSQRMNSLDPALAVVEKGAYVVKVMQDGNGNFKTVKDAINSIPSGNTERVIVYIGGGTNTEKSRLIRQSLL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0700 110 Pfam Pectinesterase 61 102 IPR000070 GO:0030599|GO:0042545
Dere01g0700 110 SUPERFAMILY Pectin lyase-like 58 105 IPR011050 -
Dere01g0700 110 Gene3D - 9 108 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0700 Dere-ChrDere01 14238780 14239112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0700 11 101 Carbohydrate Esterase AT5G07430 43.956 1.51e-22 88.2