Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0698 ATGATGGCCATCAAAACAAGCCGTGATTCCACCTTTCAGGTGGTCGTTGTGGCGGCTGTCCTGGCCGCTACGGCCGTGCTCGCGAACGACAAAGTGCCGGTGCCGGAGGACGAGGCCCAACTGGAGAATTGGTTCCGGCAGAACGTGAAGCCATTTGCAAAGCGAAAGACTCTGGACCCGGAAGTTGTGGCGGCAGAAAATGGTCCTCCTAGGATAGTGAGGGTGTCGCAAGATGGAAGAGGGGACTTCAAGACCATCACGGAAGCCATTAACAGCATCCCAAACGATAACACCAAGCGTGTGATCGTGCAGATTGCAGGTGGAACTTATAAAGAGAAAGTCACGATTAATAGCACAAAGCATTTCGTCACTCTCCTTGGAGATCCGAAGAACATGCCAAACTTGACCTTTGATGGCACTGCCAAACAATACGGCACCGTCGACAGTGCCACCTTGATTGTCTTAGGAAACTACTTCGTCGCAGCTAATCTCATTATCTCGAATTCAGCGCCCATGCCGGATGGGCGGAGAGAGGGTGCTCAGGCGGCGGCTTTAAGGGTGTCCGGCGACAGATCAGTGTTGTACAACTGCCAACTGTTGGGGTTCCAGGACACACTGTGCGATGATAGGGGGAATCATCTCTTCAAGGACTGCACCATTCAAGGCACTGTGGATTTCATATTCGGAAGTGGAAAGTCGTTATATCTAAAGACAAAGTTGATTGTGGTGGGGAATGTTGGAGGAGTGATAGCAGCACAAGCGAGAAAGAGTGAGGCAGAGAACATTGGATACTCTTTTGTTCACTGCGACATAAGTGGAACTGCTAAAGGGACGTTCTTGGGCCGAGCATGGATGTCTCATGGGAAAGTTGTCTATGCTTACACTTCAATGAGCAGCATTATTACTCCTCTTGGCTGGAACGATAAAAATAATCCTCAAAATGCCCAGACTGTATATTTTGGAGAGTACAAGAATACTGGAGCGGGTGCTGTTCAAAACGGGCGTGTGCCCTTCATAAAGCATCTAAATGATGCACAAGCTAAGCCATTTCTGTCACTTGGCTTTATTGAGGCTTCTAAGTGGCTACTTCCTCCTCCTAAAATCTAA 1107 0.4896 MMAIKTSRDSTFQVVVVAAVLAATAVLANDKVPVPEDEAQLENWFRQNVKPFAKRKTLDPEVVAAENGPPRIVRVSQDGRGDFKTITEAINSIPNDNTKRVIVQIAGGTYKEKVTINSTKHFVTLLGDPKNMPNLTFDGTAKQYGTVDSATLIVLGNYFVAANLIISNSAPMPDGRREGAQAAALRVSGDRSVLYNCQLLGFQDTLCDDRGNHLFKDCTIQGTVDFIFGSGKSLYLKTKLIVVGNVGGVIAAQARKSEAENIGYSFVHCDISGTAKGTFLGRAWMSHGKVVYAYTSMSSIITPLGWNDKNNPQNAQTVYFGEYKNTGAGAVQNGRVPFIKHLNDAQAKPFLSLGFIEASKWLLPPPKI 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0698 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 362 - -
Dere01g0698 368 FunFam Pectinesterase 69 364 - -
Dere01g0698 368 SUPERFAMILY Pectin lyase-like 69 362 IPR011050 -
Dere01g0698 368 Pfam Pectinesterase 73 358 IPR000070 GO:0030599|GO:0042545
Dere01g0698 368 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Dere01g0698 368 Gene3D - 70 364 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0698 Dere-ChrDere01 14189550 14191085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0698 20 368 Carbohydrate Esterase AT1G69940 55.587 4.15e-149 424