Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0672 ATGGACATCAATATTTGGTTGATGATGATCTTCTTCCTTCAACGCAAGATCAGCGTCGATGGCGTTAACACCTCCTATGCATACAAAGCCACTGAACTTATCTTTGTTAACTGTGGTTCTTCCAACTCCGTTCAATTAGGTAATCGGACATGGAGTGCAGATATCAACACTGAACAGTTTTCTCTCATCGAAAATCTTCAGAATAACCATCTCTTGTCATCAGTGCAGGCCAATCCAGTTCAAACCTCTATACCTTCTTCAGTGAACCAAGTCCCTTACGCAACCGCACGCCTTTCTCTCTCTGAATTCACCTACTCATTTGTGGCCACTGATGGCCCCAAATTTGTTCGTCTCCACTTTTACCCTACTTCCTACCCCAACTTTGATCGCTTTTCTTCCCTCTTCTCCGTTAAAACCGGCCCTTTCACTCTTCTTAAAGACTTCAATGCTTCACTCACAGCGGACTACGATGATGATTCAAGGATAATTGTAATTCGAGAATACTGTATCTATGTCCAACCTGGTGATCAGAGGCTGAACATAACCTTCATACCCACCCATCCAAACGCCTATGCTTTCATTAATGGGATCGAGGTTGTTTCTATGCCCACATACCTTTATTACACTAACCCCAGTAGGCCAGATTTGGATTTGAATTTTGTTGGTCATGAAAACTCTCACTACCGAATCCAGAACAAAATGGCTCTAGAGATGTTATACAGAATCGATGTTGGTGGACCCCGAATTTCTGCCGATGAAGACACCGGAATGTTTCGTTCTTGGGACGATGATCTGCAATACTTGGAAAAGGAACATGCACGTAGTCTTCCAAATTATTTTGGTCAACCAAACCTCAAATACACAAAAATTCAGAACTACACAGCACCAGACGGAGTATATCTAACTGGCCGTAGCTACGGTAAGAATGAGACTTCAATAACATATAATGTGACTTGGGAGTTTGAAGTGGACTCAGGTTTCACATACATGGTAAGGCTCCATTTTTGTGAGCTAGAGCTAACATTTCAAACTTCTAGCAAAAGAGTTTTCCTGATCTTCATTGCTGACAATTTGGCCGAGCCTCATGCCGATGTGATTGAGTGGACTGGAGATAATCTAACACCTTACTATAAGGACTATGCAGTGTCAATGTTAAGCGAAGAACAAAACTTGAAGAAACTCAATCTTTCCATTAAGTTGCAACCGAACCCCAATCCTAGGGTAAGCGCTTACAATGATGTGATATTGAACGGAATCGAGGTCTTCAAAATAAGTAACAATGGCAATCTTGGAGGGCCCAATCCTGACCCACGCGCATCTCCCTCAGCACAGCCAGTCATGCCTTCGATCAACACTTCCAAAAGCTTGAAGAAAATGACAATAACTTTCATCGTTGTTGGTGTAGCTTCAGGCTTCATTCTTCTATCTCTTGTCGCTTGGCTCATTTTCTGGCTTCGAAAAACTAGAGGACATAAATCTACAGCCACGTCCAAAACAAGTAAGAGTACCCATGGGTCGTCATCACTACCGTCCGACTTGTGTCGATGCTTTTCAATTGCAGAGATCAGAGTAGCCACGAATAATTTCGATGATATTTTCGTAGTGGGAGTTGGAGGGTTCGGTAATGTGTACAAAGGCTACATCGATGACGGTACGACACCAGTAGCGATCAAACGGCTCAAACCGGGTTCACAACAAGGGGCTCAGGAGTTCCAGACTGAGATTGAGATGCTCTCTCGGCTTCGCCACATTCATTTGGTGTCGCTCATTGGTTACTGCAACGACGGAGGCGAGATGATCCTCGTGTATGAATTCATGGCACGTGGGACTCTCCGTGACCATCTTTACGGTTCAGACTGTAGCGAACCACTTTCTTGGAAGCAACGACTGGAGATGTGCCTAGGTGCTGCGCGTGGACTGCACTATCTTCATACGGGTGCAAATCACAACATCATTCATCGCGACGTGAAGAGCACGAACATCTTGGTGGATGAGAAATGGGTGGCAAAAGTTTCAGATTTTGGACTATCCAAAGTGGGACCCATGGGTGTGTCAAGGTCTCACATTAGCACTGTAGTCAAGGGAAGCCTTGGGTATTTGGATCCAGAATACTACAAGCGCCAACGGTTGACTCTTAAGTCTGACGTGTACTCATTTGGGGTGGTGCTGCTTGAAGTATTGTGTGGGAGGCCGCCTTTGGTACGTACGGTGGAGAAGCAGAAAGCAAGTTTAGTGGAGTGGGTCCGGAAATGCCGTCATGACGGCGTGATTCATCACACGGTAGATCCGTTGCTCATAGAAAGTATCACGCCAGAGTGCCTAAAGGCATTCAGTGCCATGGCGCTAAGTTGTTTAAATGAAGATGGGAATGAACGACCATCAATGAATGATGTGGTGTGGGGCCTAGAGTTTGCGTTGGAGCTGCAAGAGAGCACAATGGGGACAGTAATTGGTGAGAGTGGAACCCAGGAAGCGGAGAAAGAGAAGTCGTTGAGGAAATGGGTGGAAGGTGAAGATAGTGAAGTGAGATTTACAAGTAGTAGTAGTGGAACAGCGAATGAATCAAAGAGTAGTGGAATGGCCATTTGCAATAGCAAGGAGGAGGCTTTAAATTCTGGGGTGGTCTTTTCTGAGCTTGGAAAATCCAGGGAGATAAATTAA 2661 0.4495 MDINIWLMMIFFLQRKISVDGVNTSYAYKATELIFVNCGSSNSVQLGNRTWSADINTEQFSLIENLQNNHLLSSVQANPVQTSIPSSVNQVPYATARLSLSEFTYSFVATDGPKFVRLHFYPTSYPNFDRFSSLFSVKTGPFTLLKDFNASLTADYDDDSRIIVIREYCIYVQPGDQRLNITFIPTHPNAYAFINGIEVVSMPTYLYYTNPSRPDLDLNFVGHENSHYRIQNKMALEMLYRIDVGGPRISADEDTGMFRSWDDDLQYLEKEHARSLPNYFGQPNLKYTKIQNYTAPDGVYLTGRSYGKNETSITYNVTWEFEVDSGFTYMVRLHFCELELTFQTSSKRVFLIFIADNLAEPHADVIEWTGDNLTPYYKDYAVSMLSEEQNLKKLNLSIKLQPNPNPRVSAYNDVILNGIEVFKISNNGNLGGPNPDPRASPSAQPVMPSINTSKSLKKMTITFIVVGVASGFILLSLVAWLIFWLRKTRGHKSTATSKTSKSTHGSSSLPSDLCRCFSIAEIRVATNNFDDIFVVGVGGFGNVYKGYIDDGTTPVAIKRLKPGSQQGAQEFQTEIEMLSRLRHIHLVSLIGYCNDGGEMILVYEFMARGTLRDHLYGSDCSEPLSWKQRLEMCLGAARGLHYLHTGANHNIIHRDVKSTNILVDEKWVAKVSDFGLSKVGPMGVSRSHISTVVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCGRPPLVRTVEKQKASLVEWVRKCRHDGVIHHTVDPLLIESITPECLKAFSAMALSCLNEDGNERPSMNDVVWGLEFALELQESTMGTVIGESGTQEAEKEKSLRKWVEGEDSEVRFTSSSSGTANESKSSGMAICNSKEEALNSGVVFSELGKSREIN 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0672 886 FunFam FERONIA receptor-like kinase 33 203 - -
Dere01g0672 886 PANTHER OS03G0124300 PROTEIN-RELATED 8 500 IPR046957 GO:0004672
Dere01g0672 886 Gene3D Phosphorylase Kinase; domain 1 514 605 - -
Dere01g0672 886 CDD STKc_IRAK 544 799 - -
Dere01g0672 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Dere01g0672 886 FunFam Receptor-like protein kinase FERONIA 501 605 - -
Dere01g0672 886 Pfam Malectin-like domain 74 424 IPR024788 -
Dere01g0672 886 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Dere01g0672 886 ProSiteProfiles Protein kinase domain profile. 529 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0672 886 Pfam Protein tyrosine and serine/threonine kinase 535 799 IPR001245 GO:0004672|GO:0006468
Dere01g0672 886 Gene3D Transferase(Phosphotransferase) domain 1 606 825 - -
Dere01g0672 886 Gene3D - 234 427 - -
Dere01g0672 886 Gene3D - 30 203 - -
Dere01g0672 886 FunFam Receptor-like protein kinase FERONIA 606 824 - -
Dere01g0672 886 FunFam FERONIA receptor-like kinase 234 425 - -
Dere01g0672 886 SMART serkin_6 529 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0672 886 SUPERFAMILY Protein kinase-like (PK-like) 503 804 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0672 Dere-ChrDere01 13864538 13867198 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0672 17 879 Receptor kinase-like Gene Family AT3G51550 45.796 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0672 Malectin_like 2.5e-39 CL0202