Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0665 ATGATCAGCGTCGATGGCGTTAACACCTCCTATGCATACAAAGCCACTGAACTTATCTTTGTTAACTGTGGTTCTTCCAACTCCGTTCAATTAGGTAGTCGGACATGGAGTGCAGATATCAACTCTGAACAATTTTCTCTCATCGAAAATCATCAGAAAAACCATCTCTTGTCATCAGTGCAGGCCAACCCAGTTCAATCCTCGATCCCTTCTTCAGTGAACCAAGTCCCATACACAACCGCGCGCCTTTCTCTCTCTGAATTCACCTACTCATTTGTGGCCACTGATGGCCCCAAATTTGTTCGCCTCCACTTTTACCCTACTTCCTACCCCAACTTTGATCGCTTTTCTTCCCTCTTCTCCGTTAAAACCGGCCCTTTCACTCTCCTTAAAGACTTCAATGCTTCACTCACAGCAGACAACGATGATGATTCAAGGATAATTGTATTTCGAGAATACTGTATCTATGTCCAACCTGGTGATCAGAGGCTGAACATAACCTTCATACCCACCCATCCAAACGCCTATGCTTTCATTAATGGGATCGAGGTTGTTTCTATGCCCACATACCTTTATTACACTAACCCCAGTAGGCCAGATTTGGGTTTGAATTTTGTTGGTCATGAAAACTCTCCCTACGAAATCCGGAACACAATGGCTCTGGAGTCGTTATACAGAATCGATGTTGGTGGATCCCAAAGTTCTGCCGATGAAGACACCGGAATGTTTCGTTATTGGGACGATGATAATCAATACTTGGAAAAGGAACATCCACATAGTCTTCCAACTTATTTTCGTCAACAAGACCTCAAATACACAAAAATTCAGAACTACACAGCACCAGACGGAGTATATCTAACTGGCCGTAGCTACGGTATGGATGAGACTTCAATAACATATAATGTGACTTGGGAGTTTGAAGTGGACTCAGCCGATGTGATTGAGTGGGCTGGAGATAATCTAACACCTTACTATAAGGACTATGCAGTGTCGATGTTAAGCGAAGAACAAAACTTGAAGAAACTCAATCTTTCCGTTAAGTTGCAACCACACCCCAATCCTAGAGTAAGTGCTTACAATGATGTGATATTGAATGGAATCGAGGTCCTCAAAATAAGTAACAATGGCAATCTTGGAGGTCTAAATCCTGACCCACATGCATCTACATCACTACAGCCATTTGTGCCACTGATCAACACTTCTGAAGACTCAAAGAAAAGAAAGATAATTTCCATCGTTGTTGGTGTGGCTTTAGGCTTCCTTATGCTATGTCTTGTTTTGTTCAAGTACTATCAAAGGAAAATTAGAGCACAGAAATCCACATCCAAGACCAAAACAAGCAAGAGTACCCATGGATCGTCATCTCTGCCATCCGAATTTTGTCGTTGCTTCTCAATCGCCGAGATCAGAGTAGCCACAAATAATTTCGATGACATTTTCTTAGTGGGAGTTGGAGGGTTTGGTAATGTGTACAAAGGCTACATCGATGACGGTACGACACCAGTGGCGATCAAGCGGCTCAAACCGGGTTCGCAACAGGGGGCTCACGAGTTCCAGACCGAGATCCAAATGCTTTCTCAACTTCGTCACAATCATTTGGTGTCCCTCATCGGTTTTTGCAACGATGGGGACGAGATGATTCTTGTGTATGAATTCATGGCGCGTGGGACTCTCCGTGACCATCTTTACGTATTGTGTGGAAGACCGCCTTTGGTACGTACGATGGAGAAGCACAAAGCAGGTTTAGTGGAGTGGGTCCGAAGATGCCATCAAGATGGCGTGATTCATCAGACGGTTGATCCGATGCTAATAGAAAGTATCACACCAGAAAGCTTAAAGGCATTCAGCACCATGGCATTGAGTTGTTTAGTTGAAAATGGAAATCAACGGCCATCAATGAATGATGTGGTGTGGGGCCTAGAGTTTGCATTGGAGCTGCAAGAGAGCACGAAAGGGACAGTGATTGGTGAGAGTGAGACCCAGAAGGAGGAGGAAGAAAAATTGTTGAGGAAAGAGGTGGAAGATAAAGATAGAAAAAGTGAGGCTTCTGCAGATTCATGGGACAACATTCATGAAGGCAAGTCGTCGCATATGAACACCATCACTGAGTCCATTTATTACATGGAGGCCAATTTGTTCATGGATTCTAGCTTAGCCACGTTTATGGATATTAGTGAAATTGCAGATACCTTCAAAAGAGGTAAACCTGCTATTCCATGCCCTCCTTTGCAATCCTACTCTTCCTGCATCGGCCTGTCCGAATTTGATCCAAGACGATCACCATATTGTGACCCACGTGAGAGAGATCCAACATGCAAGTCATGA 2325 0.4391 MISVDGVNTSYAYKATELIFVNCGSSNSVQLGSRTWSADINSEQFSLIENHQKNHLLSSVQANPVQSSIPSSVNQVPYTTARLSLSEFTYSFVATDGPKFVRLHFYPTSYPNFDRFSSLFSVKTGPFTLLKDFNASLTADNDDDSRIIVFREYCIYVQPGDQRLNITFIPTHPNAYAFINGIEVVSMPTYLYYTNPSRPDLGLNFVGHENSPYEIRNTMALESLYRIDVGGSQSSADEDTGMFRYWDDDNQYLEKEHPHSLPTYFRQQDLKYTKIQNYTAPDGVYLTGRSYGMDETSITYNVTWEFEVDSADVIEWAGDNLTPYYKDYAVSMLSEEQNLKKLNLSVKLQPHPNPRVSAYNDVILNGIEVLKISNNGNLGGLNPDPHASTSLQPFVPLINTSEDSKKRKIISIVVGVALGFLMLCLVLFKYYQRKIRAQKSTSKTKTSKSTHGSSSLPSEFCRCFSIAEIRVATNNFDDIFLVGVGGFGNVYKGYIDDGTTPVAIKRLKPGSQQGAHEFQTEIQMLSQLRHNHLVSLIGFCNDGDEMILVYEFMARGTLRDHLYVLCGRPPLVRTMEKHKAGLVEWVRRCHQDGVIHQTVDPMLIESITPESLKAFSTMALSCLVENGNQRPSMNDVVWGLEFALELQESTKGTVIGESETQKEEEEKLLRKEVEDKDRKSEASADSWDNIHEGKSSHMNTITESIYYMEANLFMDSSLATFMDISEIADTFKRGKPAIPCPPLQSYSSCIGLSEFDPRRSPYCDPRERDPTCKS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0665 774 Pfam Protein tyrosine and serine/threonine kinase 482 563 IPR001245 GO:0004672|GO:0006468
Dere01g0665 774 FunFam Receptor-like protein kinase FERONIA 448 552 - -
Dere01g0665 774 Pfam Malectin-like domain 61 309 IPR024788 -
Dere01g0665 774 ProSitePatterns Protein kinases ATP-binding region signature. 482 505 IPR017441 GO:0005524
Dere01g0665 774 Gene3D Transferase(Phosphotransferase) domain 1 561 646 - -
Dere01g0665 774 FunFam FERONIA receptor-like kinase 18 188 - -
Dere01g0665 774 MobiDBLite consensus disorder prediction 653 694 - -
Dere01g0665 774 PANTHER OS03G0124300 PROTEIN-RELATED 310 444 IPR046957 GO:0004672
Dere01g0665 774 MobiDBLite consensus disorder prediction 657 692 - -
Dere01g0665 774 ProSiteProfiles Protein kinase domain profile. 476 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0665 774 Gene3D - 15 188 - -
Dere01g0665 774 Gene3D - 219 311 - -
Dere01g0665 774 SUPERFAMILY Protein kinase-like (PK-like) 443 597 IPR011009 -
Dere01g0665 774 Gene3D Phosphorylase Kinase; domain 1 434 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0665 Dere-ChrDere01 13786728 13793195 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0665 564 693 Receptor kinase-like Gene Family AT3G51550 37.692 5.51e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0665 Malectin_like 1.3e-21 CL0202