Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0650 ATGTGGAATTCAAAGCATTGGGTTGCTACAAATAACTTCAACAACAAGAACTTGATTGGCAAAGGTGGATTTGGAAATGTGTACGAAAGGTACCTCCCAAATGGTATAGTTATAAAAGTGAAGGGGCTGAAAGATGGCAATGCCATTGGAGGTGAGATCCAATTCCATATTGAAGTTGAGATTATTGGCTTAGCTATGCATAGGAACCTCCTTCATTTGTATGGATTTTGTATGACAACTATTAAGAGGCTCTTGGTTTATCCATACATGTTTAATGGTAGTGTTGCTTCACGTCTTAAAGCCAAGCCTGTTCTTTATTTGGGAACAAGAAAGAGGATGGCCCTAGGAGCTGCAAGGGGCTCGCTATATTTGCATGAGCAGTGTGAACCCAAGATTATTCACAAAGATGTAAAGGTTGCAAATATCTTGCTTGATTACTTTGAGGTTATGGTACAGGATTTTGGGTTGGCAAAGCTACTGGATCACTATGATTCTCATGTGACAATAGCTGTGAAAGGCATTGTTGGGCACATAGCCCCAGAGTATCTCTTAACAGGCCAATCCTCTAAAAAAAAACATGTATTTGGCTTTGGAATCCTTTTTCTTGAATTAATCTGA 618 0.3932 MWNSKHWVATNNFNNKNLIGKGGFGNVYERYLPNGIVIKVKGLKDGNAIGGEIQFHIEVEIIGLAMHRNLLHLYGFCMTTIKRLLVYPYMFNGSVASRLKAKPVLYLGTRKRMALGAARGSLYLHEQCEPKIIHKDVKVANILLDYFEVMVQDFGLAKLLDHYDSHVTIAVKGIVGHIAPEYLLTGQSSKKKHVFGFGILFLELI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0650 205 FunFam Somatic embryogenesis receptor kinase 1 3 89 - -
Dere01g0650 205 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 205 - -
Dere01g0650 205 ProSiteProfiles Protein kinase domain profile. 13 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0650 205 SMART serkin_6 13 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0650 205 SUPERFAMILY Protein kinase-like (PK-like) 4 205 IPR011009 -
Dere01g0650 205 Gene3D Phosphorylase Kinase; domain 1 4 89 - -
Dere01g0650 205 Gene3D Transferase(Phosphotransferase) domain 1 90 205 - -
Dere01g0650 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Dere01g0650 205 Pfam Protein kinase domain 14 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0650 Dere-ChrDere01 13586532 13588387 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0650 8 205 Receptor kinase-like Gene Family AT5G16000 71.859 7.92e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere01g0650 Pkinase 5.9e-27 CL0016