Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0647 ATGGCTTCTCCAAATTCTTCCCCTTCTTCTGCAGTGCCACCCACTTCTGCTGATATTTCACCACCACCACCGTTATCTCCTTCAGATTCCCTCGTAAATTCTTCCATCACATCACCACCTCCCACTTCTTCTCCGCCCAGTCAAACCTCTAATACCCCTGCTCCTTCATCTCCTTCTGACCCTGCAACCCCACCTCCTTCCCCGTCTCTTTCTCCTCCACCAGGACCACCAGCGTCTACACCACCGCTTACTTCATCCCCACCTCCAGCATTGCCACCGCCTACTTTGCCGTCTACACCGGATTCTCCACCACCAACACCTCCTGCATTGCCACCACCATCGCCTACAACACCTCCACCAGCTACTGCCACTGCCTCTCCCCCGACTGAGAATTCACCTACCCCTCCAGATTTATCCCCATCACCTCCAGTTGCAGGGTCTCCTCCCCCTCAAGCCTCAAATGTACCTCCTGAGGCAGTGCCACCACCTCCCTCTAGACACCTTTCACCTCCTACGGCAGTTCCACCTCCCTCTCAGCATAGTTCACCTTCTCCTCCTCCTCCAGAGAACGTCTCAACACCACCAACCTCCCATTCCCCTCCTCCGCCACAGGGAAAGCCGCCAGAAAGTACTCCTTTGCTTACACCCCCTCCATCTGTTTCTAAATCTCCTTCTCCTCCTTCCACAAGTATTCCCCCTCAATCCTCAACACCATCACCTCCTCCATCAGTTCCATCTGCCTCTTCATCTCCTCCTTTAGTTCCAACTGCCTCTTCACCTCCGTCAACTTCTTCGCCTACTCCTCCAACTAATACATCAGCAGCTGGGGGCCCAACTGTGTCCCTACCATCAATTCCAAAAGAGAAACCAACTGCAAAATCAACTGATGGTACTGGTATAACTACAAATGCCCCACCTACACATACAGGAGGGTTAAATACAGGAGGTGGTGTGGCTATTGGCATTGTAGTTGGTTTTGTTGTCCTCAGTCTTCTTATTATGGCCATGTGGTTTGTAAAACGAAAGAGGAAGGAAACAGGATCAAAAGTTGGTTATGGTATGACTTCTCCGTTTGCCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCGGCTCCCTTTTATGGTAGTAACTCTGGTAGCGATTTCATGTATTCTCCATCAGAGCCTGGTGGAGTAAGTAAGTCAAGATCATCATTCATGTATGAAGAACTAGCCCAAGCAACAAATGGATTTTCAGCACAAAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGTTTGCTCACAGATGGAAGAGAAGTAGCTGTTAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAGCGTGAATTCCAAGCAGAAGTCGAGATCATTAGCCGAGTACATCATCGTCATCTGGTTTCCTTGGTGGGTTACTGTATATCAGAGCATCAAAGATTGCTTGTCTATGACTATGTGCCCAACAATACCCTTCATTACCATCTTCATGGTGAAGGCAGGCCAGTTTTGGACTGGGCTACCAGAGTCAAGGTGGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGTATCATTCACCGAGACATTAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCAAGTTTCTGACTTCGGGCTTGCAAAATTAGCCTTGGATTCATACACACATGTAACCACTCGTGTGATGGGAACCTTTGGGTATATGGCTCCAGAATATGCAACAAGTGGGAAATTGACTGAAAAGTCTGATGTTTACTCCTTTGGGGTTGTGCTTTTGGAGCTAATTACTGGTCGGAAGCCCGTGGATGCCTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGACCGCTGCTAAGTGAGGTACTTGATAATGAAGACTTCGAACTATTGGTGGATCCAAGGTTAGAGAAGAGCTATAATAAAAATGAAATGTTCCAGATGATTGAGGCAGCTGCAGCCTGTGTACGTCACTCTGCGGCGAAGAGGCCGCGGATGAGTCAGGTTGTCAGAGCCTTGGATTCCTTGTATGAATTAGCAGATCTCAATAATGGAATGAAACCTGGGCAAAGTTCAGTCTTCGATTCTGCAGAGCATAATGAACAAATCAGAATGTTCAGGAGGATGGCTTTTGGAAGCCAAGATTACAGCACGAGTTATTTCAATGAGTCTCATAGTAGCTGGAGGAGTAGAGATCAGGAGAACCAAAGCTCCACTACGTTCTCTCAAAATAGATCTGGACCATGGAACGTTTAA 2301 0.4802 MASPNSSPSSAVPPTSADISPPPPLSPSDSLVNSSITSPPPTSSPPSQTSNTPAPSSPSDPATPPPSPSLSPPPGPPASTPPLTSSPPPALPPPTLPSTPDSPPPTPPALPPPSPTTPPPATATASPPTENSPTPPDLSPSPPVAGSPPPQASNVPPEAVPPPPSRHLSPPTAVPPPSQHSSPSPPPPENVSTPPTSHSPPPPQGKPPESTPLLTPPPSVSKSPSPPSTSIPPQSSTPSPPPSVPSASSSPPLVPTASSPPSTSSPTPPTNTSAAGGPTVSLPSIPKEKPTAKSTDGTGITTNAPPTHTGGLNTGGGVAIGIVVGFVVLSLLIMAMWFVKRKRKETGSKVGYGMTSPFASSQNSGTIFLRPQSPAPFYGSNSGSDFMYSPSEPGGVSKSRSSFMYEELAQATNGFSAQNLLGEGGFGCVYKGLLTDGREVAVKQLKVGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGEGRPVLDWATRVKVAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDSYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLSEVLDNEDFELLVDPRLEKSYNKNEMFQMIEAAAACVRHSAAKRPRMSQVVRALDSLYELADLNNGMKPGQSSVFDSAEHNEQIRMFRRMAFGSQDYSTSYFNESHSSWRSRDQENQSSTTFSQNRSGPWNV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0647 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Dere01g0647 766 MobiDBLite consensus disorder prediction 39 267 - -
Dere01g0647 766 SMART serkin_6 415 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0647 766 MobiDBLite consensus disorder prediction 294 310 - -
Dere01g0647 766 Pfam Protein tyrosine and serine/threonine kinase 418 688 IPR001245 GO:0004672|GO:0006468
Dere01g0647 766 FunFam Proline-rich receptor-like protein kinase PERK8 387 490 - -
Dere01g0647 766 SUPERFAMILY Protein kinase-like (PK-like) 394 688 IPR011009 -
Dere01g0647 766 CDD STKc_IRAK 421 691 - -
Dere01g0647 766 Gene3D Transferase(Phosphotransferase) domain 1 491 707 - -
Dere01g0647 766 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 326 737 IPR047117 -
Dere01g0647 766 MobiDBLite consensus disorder prediction 1 313 - -
Dere01g0647 766 ProSitePatterns Protein kinases ATP-binding region signature. 421 443 IPR017441 GO:0005524
Dere01g0647 766 FunFam proline-rich receptor-like protein kinase PERK8 491 703 - -
Dere01g0647 766 PRINTS Proline rich extensin signature 87 103 - -
Dere01g0647 766 PRINTS Proline rich extensin signature 46 58 - -
Dere01g0647 766 PRINTS Proline rich extensin signature 12 24 - -
Dere01g0647 766 PRINTS Proline rich extensin signature 61 82 - -
Dere01g0647 766 MobiDBLite consensus disorder prediction 742 766 - -
Dere01g0647 766 Gene3D Phosphorylase Kinase; domain 1 389 490 - -
Dere01g0647 766 ProSiteProfiles Protein kinase domain profile. 415 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0647 Dere-ChrDere01 13471526 13478914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0647 199 748 Trihelix Transcription Factor Family AT5G38560 60.682 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere01g0647 PK_Tyr_Ser-Thr 4e-48 CL0016