Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0617 ATGCCATCATCATCATCATCGCCGAAACAAAACCATCTGAATTCACAGTTTAGTACTTCTCTTCAATCTTCATCATCTTCTCAAATTAACTGGTTCCTTCCTATTCAAACCATGAATTTTCTCCTCCCTTCAGACCCGTCTTCTCATTACAACACCACCACCTTTGAATTTCAACTTCAAACACTGTTCAACAACGTCCAGTTCCACAGTAACAATCCCCAGAACCCTCTTCTTCCTCACCTTCAAGACTTGAGCTCTCACTCTACTTCCGATGAAGCAGACGAGACTCACTTGCAGAGTGTGGTGGTCAGCGAGAGGAAGCACAGGAGGATGATATCGAACAGAGAGTCGGCGCGTAGGTCACGCGCCAGGAAGCAGAGGCAGCTCGACGAGCTCTGGTCCCAGGTTGTTTGGCTGCGGAGTGAGAACCACCACCTCCTGGATAAGCTAAACCATGTGTCGGATAACCATGACCGAGCCCTTCAGGAGAATGTCCAGCTCAAACAGGAGGCTAATGAGCTGCGCCAGATGCTGTGTGACATGCAGCTACAAACCCCTTTTCTTCCTTAG 570 0.486 MPSSSSSPKQNHLNSQFSTSLQSSSSSQINWFLPIQTMNFLLPSDPSSHYNTTTFEFQLQTLFNNVQFHSNNPQNPLLPHLQDLSSHSTSDEADETHLQSVVVSERKHRRMISNRESARRSRARKQRQLDELWSQVVWLRSENHHLLDKLNHVSDNHDRALQENVQLKQEANELRQMLCDMQLQTPFLP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0617 189 Pfam bZIP transcription factor 106 163 IPR004827 GO:0003700|GO:0006355
Dere01g0617 189 SUPERFAMILY Leucine zipper domain 106 155 IPR046347 GO:0003700|GO:0006355
Dere01g0617 189 SMART brlzneu 102 166 IPR004827 GO:0003700|GO:0006355
Dere01g0617 189 MobiDBLite consensus disorder prediction 85 121 - -
Dere01g0617 189 Coils Coil 150 177 - -
Dere01g0617 189 MobiDBLite consensus disorder prediction 87 121 - -
Dere01g0617 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 109 124 IPR004827 GO:0003700|GO:0006355
Dere01g0617 189 FunFam BZIP transcription factor 104 155 - -
Dere01g0617 189 Gene3D - 104 159 - -
Dere01g0617 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 167 IPR004827 GO:0003700|GO:0006355
Dere01g0617 189 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 31 184 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0617 Dere-ChrDere01 13009950 13010519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0617 62 187 bZIP Transcription Factor Family AT3G30530 60.317 7.60e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere01g0617 bZIP_1 1.8e-12 CL0018