Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0611 ATGGGTACTTGCAATTGCAACTATAAATTTTTTACTGGGGTTTCATCCATTTTCTGGTTGATGTGGGTTTCATTAGGAGACGTTCCTCGTGATAGCATTCTTATAGACTGTGGATCGCCCAACATCACTAAATTGGGAAATCATGTATTTCAGGCCGATAATTCTACTTCTGGGTTTCTTTCAACCTCAGAAACTATTTTGGCAAAGGCCAGCTCCGCTACTGTTCTTCCCTCATCTTTTGATGCAAGCCTTTACCAAACCGCTAGAATCCTTGAAGGTGTTTCTCAATACACATTCCCAATCAAGACACATGGGAGGCACTGGATTCGCTTGTACTTCTTCCCCTTCTCTTTTGGGAAGTACAATATGAGCTTTGCAAAATTCTCTGTTTCTGCTCAAAAAAGCATCACACTGCTCAAAGACTTTCAAATGGATAGTGGTTTTGTACAGAGGGAATACTCTTTGAACATAAGCGAAAGCCAGCTTATACTCACTTTTATACCTTCTTCTAAATCATTTGCCTTTATAAATGCCTTAGAAGTTATCCCCATTCCTGATGGGGTTATTCCTGTGCATGTCAATCATGTTAGCCCACAAGGTGATGGTAAGAATCTATGGAAGCAGGCCTTGGAGACTGTCGATAGAGTGAACATGGGAAATCAAACTGTGTCACCCCTAAATGATACCTTGGGGCGTGCTTGGGTGTCCGATGGTTCGTTTCTTTTACACAGGAATCTCGCAAATTTTACCTCCAACATTACAGCGGTGAATTTCACATCAACGAACATATCGGAAGATATTGCACCCTCCCAGGTATATGGTACTTTGACTATGTCGAAAGTTGATCCAGATCCCAGAACCCACTTAAATGTGACATGGGTTTTTAATGTTGATCCTGGTTTTGATTATCTGCTTCGGTTTCACTTCTGTGACATTCTGAATCTACCACTAAGCTTTCTCTTTAATGTTTATGCTAACTCTTGGCTTGTTTCTAGTGTCAATTTTGACACTGTAACACCACATAAAGGAGCACCATATTACATGGATGCAATCACCAGAGTAAGTGGTAGCCGTAATCTGAATGTTACCGTTGGTGTACCAAGTAATCTTGCTGATAATAGTCCTCCTGCCTTTCTCAGTGGGCTGGAGATCATGAAAATGAGCAATTCTGAGGACAGCCTAGTCTTGGACTCTCAGGGCAGTTCCAAGAAAAAGCTTGGCGTCATACTAGGTTTGGTGATTGGTTCGGTTGTGCTTGTTTTATTTGTGGTTATGGCTGTCCTACTGCTATACCGAAGAAGAAGAAATCGTCTCCATGTTAGTCATGAAAATGGGAGGCACCTTTCTGGCACGAGTGGCATGGATAGTACTAACTTCTTTTCCGACTCAAAAATTGGGTATCGTTTTCCTCTTGCTGTCATCCAAGAGGCAACTAGTAATTTCAGTGAAGATCTGGTCATTGGTGTGGGTGGTTTTGGGAAGGTTTACGAAGGAATTTTCAGGGATGGAACAAAGGTAGCTGTGAAGAGGGGAGCATCTCAATCACAACAAGGTCTTGCAGAGTTCAGAACCGAAATTGAGATGCTATCGCAGTTTCGCCACCGGCATTTGGTATCATTGATTGGATACTGCAATGACCAAAATGAGAGGATCATTATATATGAGTACATGGAAAAAGGGACACTAAAGAACCATTTGTATGGGTCAGATGATATTCGGAGCTTAAATTGGAGGCAGAGGCTAGAAGTCTGCATAGGAGCAGCCAAAGGGCTTCACTATCTTCACACTGGCTCTAACAAGGCAATCATTCACCGTGATGTTAAATCAGCAAATATACTTCTAGATGAAAATTTCATGGCCAAGGTTGCTGATTTTGGCCTTTCAAAGACTGGACCTGAGATTGATGAGACGCATGTCAGCACTGCAGTGAAAGGAAGCTTTGGATATCTCGATCCAGAATACTTAACCACACAGCAACTAACAGAAAAATCAGATGTTTACTCCTTTGGTGTGGTCATGTTTGAAGTCCTCTGTGGGAGAACTGTGATTGACCCATCACTCCCAAGGGAGAAGGTGAACCTGGTTGAATGGGTGTTGAAATGTCTCGAGAGAAAGAAGTTAGAGGAAATCGTGGATGCTCGTCTTGCGGGTCAGATAGAGTCAGATTCACTGCAGAAGTTTGTAGAGATTGCAGAAAAGTGCCTAGCTGAACATGGCAGTAACAGGCCTACCATGGGAGATGTGTTGTGGCACTTGGAGTTTGCTCTACGACAAGAAGGTGTTAGTCGTGAAGTATCGCAGATTCGTCATATGAATCGCTCGGACACTGGTTTATCTGGTATGGAATACACCATTGGAAGCGTAGGTGACCTCTCTGGTGTTTCAATGAGCAAGGTGTTTGCCCGAATGGTGGGAGAGGACAAAAGGTAG 2430 0.4288 MGTCNCNYKFFTGVSSIFWLMWVSLGDVPRDSILIDCGSPNITKLGNHVFQADNSTSGFLSTSETILAKASSATVLPSSFDASLYQTARILEGVSQYTFPIKTHGRHWIRLYFFPFSFGKYNMSFAKFSVSAQKSITLLKDFQMDSGFVQREYSLNISESQLILTFIPSSKSFAFINALEVIPIPDGVIPVHVNHVSPQGDGKNLWKQALETVDRVNMGNQTVSPLNDTLGRAWVSDGSFLLHRNLANFTSNITAVNFTSTNISEDIAPSQVYGTLTMSKVDPDPRTHLNVTWVFNVDPGFDYLLRFHFCDILNLPLSFLFNVYANSWLVSSVNFDTVTPHKGAPYYMDAITRVSGSRNLNVTVGVPSNLADNSPPAFLSGLEIMKMSNSEDSLVLDSQGSSKKKLGVILGLVIGSVVLVLFVVMAVLLLYRRRRNRLHVSHENGRHLSGTSGMDSTNFFSDSKIGYRFPLAVIQEATSNFSEDLVIGVGGFGKVYEGIFRDGTKVAVKRGASQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCNDQNERIIIYEYMEKGTLKNHLYGSDDIRSLNWRQRLEVCIGAAKGLHYLHTGSNKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDETHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRTVIDPSLPREKVNLVEWVLKCLERKKLEEIVDARLAGQIESDSLQKFVEIAEKCLAEHGSNRPTMGDVLWHLEFALRQEGVSREVSQIRHMNRSDTGLSGMEYTIGSVGDLSGVSMSKVFARMVGEDKR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0611 809 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Dere01g0611 809 SUPERFAMILY Protein kinase-like (PK-like) 456 755 IPR011009 -
Dere01g0611 809 PANTHER OS07G0166700 PROTEIN 468 758 IPR045272 GO:0004714|GO:0006468
Dere01g0611 809 FunFam Putative receptor-like protein kinase 32 185 - -
Dere01g0611 809 Gene3D Transferase(Phosphotransferase) domain 1 557 776 - -
Dere01g0611 809 CDD STKc_IRAK 487 753 - -
Dere01g0611 809 Gene3D Phosphorylase Kinase; domain 1 445 556 - -
Dere01g0611 809 ProSiteProfiles Protein kinase domain profile. 481 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0611 809 FunFam Receptor-like protein kinase FERONIA 557 774 - -
Dere01g0611 809 Pfam Malectin-like domain 35 387 IPR024788 -
Dere01g0611 809 Pfam Protein tyrosine and serine/threonine kinase 486 749 IPR001245 GO:0004672|GO:0006468
Dere01g0611 809 Gene3D - 32 183 - -
Dere01g0611 809 Gene3D - 209 389 - -
Dere01g0611 809 SMART serkin_6 481 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0611 809 FunFam receptor-like protein kinase FERONIA 446 556 - -
Dere01g0611 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0611 Dere-ChrDere01 12890177 12892606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0611 8 809 Receptor kinase-like Gene Family AT3G46290 50.180 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0611 Malectin_like 9.7e-28 CL0202