Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0609 ATGTTGGTGAATGAGGCAAAAAATGTGTTGAAGGTTTGTGACTTTGGTAATGCCATGTTTGCTGGAAAGAATGAAGTTACACCATACCTTGTGAGTCGCTTTTATCGTGCTCCTGAGATAATACTTGGGTTGCCATATGACCATCCATTGGATATGTGGTCTGTAGGCTGCTGTTTGTATGAACTCTATACTGGAAAAGTTCTTTTTCCTGGTCCTTCTAACAATGACATGTTACGGCTTCACATGGAACTGAAGGGTCCATTTCCGAAGAAGATGCTTCGTAAGGGGGCATTTATTGAACAGCATTTTGACCAGGACTTGAATTTTCTTGCTACAGAGGAGGATCCAGTAACAAAAAAGGCTATAAAGCGGTTGATTCTCAACATAAAGCCAGCAGATATCGGAACAATCATTGCTGGCTCTCCTGGGGAGGATCCGAAGATGTTAGCCAATTTCAAATATCTTCTGGACAAGATTTTTGTCCTGGATCCAGACAAGAGGTTGACAGTGTCACAAGCATTAAACCACCCATTCATCACTGGCAAGTGA 549 0.4208 MLVNEAKNVLKVCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFIEQHFDQDLNFLATEEDPVTKKAIKRLILNIKPADIGTIIAGSPGEDPKMLANFKYLLDKIFVLDPDKRLTVSQALNHPFITGK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0609 182 Gene3D Transferase(Phosphotransferase) domain 1 7 179 - -
Dere01g0609 182 SUPERFAMILY Protein kinase-like (PK-like) 3 181 IPR011009 -
Dere01g0609 182 Pfam Protein kinase domain 2 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0609 182 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0609 182 PANTHER DUAL SPECIFICITY PROTEIN KINASE 1 180 - -
Dere01g0609 182 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0609 Dere-ChrDere01 12860066 12862289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0609 1 181 MAP Kinase Gene Family AT2G18170 33.514 1.59e-20 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Dere01g0609 Pkinase 1.7e-24 CL0016