Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0605 ATGTTGCCTTGCGTCGAAGAAAATGGGGCATCGCAGGTGAGAGATACGACGCCGCATTATAGCCAAATGGAGCTTGGGGATCTGCCAGTACGCGCCACCGCAGCCGAGTTGCCAACTCTTGGGCAACTTCTGAATTATGTCGGGGACGTACGGAAGGAAGAGTTGGGTGATGGTAGCGAGACGCCAGTGCACCACGCACTTGACATGAGCAATGTCAGTCTGGAGCCACGCGCGCTGCCTTTCGTGCTCTCGTTCAGCAACCTCACGTACAGCGTGAAGGTTCGGCAGAAACTGAACTTATCAACGCTTTTTTCGCCGCCGAGGAGAGCGGCCGCGGCGGACGGAGAGAGTTTGTTTACGAGAAGCAAGACTCTGCTGAATGATATCTCCGGCGAGGCACGTGACGGCGAGATCCTCGCCGTTATGGGGGCTAGTGGTTCGGGGAAATCCACGTTGATTGACGCCTTGGCTAACCGAATAGCTAAGGGAAGCTTGAAAGGGAGCGTGACGTTGAACGGTGAAGCGTTGGAATCGCGGCTTCTGAAAGTGATTTCAGCCTACGTAATGCAAGACGACCTTCTCTTCCCAATGCTCACAGTGGAAGAGACTCTGATGTTCGCCGCTGATTTCCGATTGCCTCGCATGCTCTCCAAATCCAAGAAGAAGATGCGAGTACAAGCTCTGATCAACCAGCTCGGTCTCAGAAACGCTGCCAAAACTGTGATCGGCGATGAAGGCCACCGCGGCGTATCCGGTGGCGAACGACGCCGTGTCTCCATCGGCATTGATATAATCCACGATCCCATCGTTCTGTTCCTCGACGAACCAACCTCGGGGCTCGATTCCACCAGCGCATTCATGGTGGTGAAGGTGTTGCAGAGAATCGCCCACAGCGGAAGCATCGTGATCATGTCCGTACACCAACCCAGCTCCCGAATCCTCGGCCTTCTCGACAGAATGATCTTTCTATCACGTGGACAAACAGTTTTCAGCGGTTCACCGATGCAACTTCCACACTTCTTCGCTGATTTTGGACATCCAATACCGGAAAACGAGAATCGAACAGAGTTCGCATTGGACCTGATTCGCGAGCTGGAAGGCTCACCCGGCGGAACTAAGAGCTTGGTGGAGTTCAACAAGTCGTGGCAGAGCATGAAGCCCCATGAAATCAGAAAAGTGGAGATTAATCAGAATGAATTGTCTTTAAAAGAAGCAATCAGTGCAAGCATCTCGAGGGGGAAACTAGTGTCAGGAGCCACAAAGACCAATAACGCAAGCCCAACTTCGATGGTACCAACATTTGCTAACCCTTTCTGGGTTGAAATGGCAAAACTCTCGAAAAGATCCATCATCAATTCGCGAAGAATGCCTGAGCTTTTTGGCATTCGAATGGCTGCGATTTTGGTAACTGGGTTTATTCTAGCTACCATGTTTTGGCAATTAGATAACTCTCCCAAAGGGGCACAAGAAAGGCTTGGCTTCTTCGCGTTCGCCATGTCCACCACCTTCTACACAACCGCAGACGCACTCCCTGTTTTCCTCCAAGAGCGATACATTTTCATGAGAGAAACTGCTTACAACGCTTACCGGCGATCATCCTACCTCATATCTCACGCCCTGGTGGCGTTACCCACATTGCTTCTCCTCTCACTGGCTTTCGCCGCGACGACGTTTTGGGCCGTGGGGCTCGACGGAGGATTATCCGGGTTCTTGTTCTACTTCCTCGTCATCTTTGCGTCGTTCTGGGCAGGGAACTCCTTCGTCACCTTCCTCTCCGGTGTGGTACCTCACGTGATGCTGGGGTACACAATAGTGGTAGCAATCTTGGCATATTTCTTGCTCTTCAGTGGGTTCTTCATTAACAGAGATAGAATCCCAAGCTACTGGATCTGGTTCCATTACTTGTCTCTTGTGAAATACCCATACGAAGCCGTGTTGCAGAACGAGTTTGATGACCCAGTAAAATGCTTCGTGAGAGGGGTGCAGATTTTCGACAACACCCCGCTTGGGTTGGTGCCGACTTCCATGAAATTGAAGCTATTGGAGAGCTTGAGTGACACATTGGGGATCAAGATCACGAGCTCAACCTGCTTGACAACAGGTGCAGATATATTGCAGCAGAACGGGATAACGCAGTTGAGCAAGTGGAATTGCTTGTGGGTAACAGTGGCTTGGGGTTTCTTGTTTAGGATTCTGTTTTACTTCTCCTTGTTGCTGGGCAGCAAGAACAAGAGGAGGTAA 2241 0.5109 MLPCVEENGASQVRDTTPHYSQMELGDLPVRATAAELPTLGQLLNYVGDVRKEELGDGSETPVHHALDMSNVSLEPRALPFVLSFSNLTYSVKVRQKLNLSTLFSPPRRAAAADGESLFTRSKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAADFRLPRMLSKSKKKMRVQALINQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAHSGSIVIMSVHQPSSRILGLLDRMIFLSRGQTVFSGSPMQLPHFFADFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMKPHEIRKVEINQNELSLKEAISASISRGKLVSGATKTNNASPTSMVPTFANPFWVEMAKLSKRSIINSRRMPELFGIRMAAILVTGFILATMFWQLDNSPKGAQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRSSYLISHALVALPTLLLLSLAFAATTFWAVGLDGGLSGFLFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGLVPTSMKLKLLESLSDTLGIKITSSTCLTTGADILQQNGITQLSKWNCLWVTVAWGFLFRILFYFSLLLGSKNKRR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0605 746 Pfam ABC-2 type transporter 307 402 IPR043926 GO:0140359
Dere01g0605 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 65 732 - -
Dere01g0605 746 SMART AAA_5 135 327 IPR003593 GO:0016887
Dere01g0605 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 98 350 IPR003439 GO:0005524
Dere01g0605 746 FunFam ABC transporter G family member 6 115 341 - -
Dere01g0605 746 Pfam ABC-2 type transporter 445 650 IPR013525 GO:0016020|GO:0140359
Dere01g0605 746 Pfam ABC transporter 126 278 IPR003439 GO:0005524
Dere01g0605 746 Gene3D - 115 341 IPR027417 -
Dere01g0605 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 341 IPR027417 -
Dere01g0605 746 ProSitePatterns ABC transporters family signature. 250 264 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0605 Dere-ChrDere01 12799591 12801831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0605 125 311 Calmodulin-binding Proteins AT2G36910 30.000 1.54e-11 66.2