Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0585 ATGGAGAACGTTGATTCAAAGAGTGTCCCCGCCATCATCGACTCGGCCTCCGGTCGCCGAGTTTCCTACTCTGAGTTCATCCGTTCCTCACAAACCTTGGCTTCCAATCTTCATTCCCTCGTAGGCCTCTCCAAAGGCCACACAGCCTTCGTATTATCCCCCAACCTCATTGAGGTCCCGATCCTCTACTTCGCCCTACTTTCACTCGGCGTGGTCGTCTCTCCGGCTAACCCTATCAGCACACGCGCCGAGATTAACTACCTCTTCCAGCTGTCATCACCGGTCATTGCCTTCGCCACGTCATTGACGGCACACAAACTCCCGCAAATCCTACGCCACGGAGTCATCCTCCTCGACTCGCCCGAGTTCGACTCGCTGACGGCGACCACGGCCAGAAGAAGCGTCGCGAGGCCAGTGGTCCCACGTGCCGAGGTGAGCCAATCGGATGTGGCCGCGATTTTGTACTCATCCGGGACCACAGGGAAGGTGAAGGGAGTAATGTTGACTCACAGGAATCTGATAGCGACTGCGGCGAGTTACGTCGCGACTCGTCCTCAGAGAGAAAGGCCGGCAGTTTTCCTCTATACGATGCCGTATTTTCACGTGTACGGGTTCGTGTACAGCCTGAGGTCGGTGATGTTTTCGGATACGGTGGTGGTGATGGAGAAGTTCGGTGTGGAGAAGATGTTGAGGGCGGTGGATGAGTTGAGAGTTACTCACCTCGCGGTGGTTCCACCGGTTGTGGTCGCGGTGGTAAAAGGAGATGTAACGGACGGCTACGATTTGAGCTCGTTGGAAGGCATCGTTTGCGGGGGGGCTCCTCTTGGGCAGGATGCCGTCGCCGCTTTCAAGTCCAAGTTCCCTGAAGTAGTGCTCATCCAGGGTTATGGGTTAACCGAATCAACAGCATCGATTTGCCGAACAATGGGACCAGTAGAGGCAAATAAACCAGGAACAACAGGGAAGCTCGTATCAGGTGTTGAAGCCAAAATTGTAGACCCAGAAACAGGCCTAGCCATGTCTCCTGGTGAACAAGGGGAACTCTGGCTCAGAGGACCACCTGTAATGAAAGGTTACGTTGATGATCCAGAAGCAAATTCGGCGACTTTGGTAGATGGGTGGTTGAGGACTGGGGACTTGTGCTATTTTGACGACGAAGGTTTCCTTTATGTTGTAGATAGATTGAAAGAATTGATCAAATACAAGGGATACCAGGTGGCACCTGCAGAGCTGGAAAACTTACTCCAGTCCCACCCAGAGATCAAAGACGCCGCAGTTATTCCTTACCCCAATGAAGAAGCTGGGCAGGTGCCAATGGCTTTTGTGATAAGACAGCCTCAAAGTTCCATTGGTGAAGCCGACGTAATTGACTTTGTGGCCAAACAGGTTGCACCATACAAGAAAATACGGCACGTAGTATTTGTGGATTCCATACCAAAGAATGCAGCAGGAAAAATATTGAGGAAAGACCTAACTAAATTTATCCTCCAAAAATCTTTGTCTAAGTTGTAA 1512 0.5152 MENVDSKSVPAIIDSASGRRVSYSEFIRSSQTLASNLHSLVGLSKGHTAFVLSPNLIEVPILYFALLSLGVVVSPANPISTRAEINYLFQLSSPVIAFATSLTAHKLPQILRHGVILLDSPEFDSLTATTARRSVARPVVPRAEVSQSDVAAILYSSGTTGKVKGVMLTHRNLIATAASYVATRPQRERPAVFLYTMPYFHVYGFVYSLRSVMFSDTVVVMEKFGVEKMLRAVDELRVTHLAVVPPVVVAVVKGDVTDGYDLSSLEGIVCGGAPLGQDAVAAFKSKFPEVVLIQGYGLTESTASICRTMGPVEANKPGTTGKLVSGVEAKIVDPETGLAMSPGEQGELWLRGPPVMKGYVDDPEANSATLVDGWLRTGDLCYFDDEGFLYVVDRLKELIKYKGYQVAPAELENLLQSHPEIKDAAVIPYPNEEAGQVPMAFVIRQPQSSIGEADVIDFVAKQVAPYKKIRHVVFVDSIPKNAAGKILRKDLTKFILQKSLSKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0585 503 Pfam AMP-binding enzyme C-terminal domain 410 485 IPR025110 -
Dere01g0585 503 Gene3D - 2 396 IPR042099 -
Dere01g0585 503 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 492 - -
Dere01g0585 503 ProSitePatterns Putative AMP-binding domain signature. 153 164 IPR020845 -
Dere01g0585 503 FunFam 4-coumarate--CoA ligase 2 397 498 - -
Dere01g0585 503 SUPERFAMILY Acetyl-CoA synthetase-like 10 497 - -
Dere01g0585 503 CDD 4CL 8 491 - -
Dere01g0585 503 Pfam AMP-binding enzyme 9 401 IPR000873 -
Dere01g0585 503 Gene3D - 397 499 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0585 Dere-ChrDere01 12509748 12516940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0585 12 503 Monolignol Biosynthesis Gene Families AT5G63380 51.000 3.76e-180 515