Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g0564 | ATGGATGGTGAAAATAGTTCATCTCTGAATAAAATGGTACAGTGTCGAATATGTCACGACGACGATGAAGACTCAAACATGGAGGCTCCCTGTTCTTGTTGTGGTAGCTTGAAGTATGCACATAGAAAATGTGTTCAAAGATGGTGCAATGAGAAAGGTGATACAATCTGTGAGATTTGCCAACAGCAATTTAAGCCTGGTTATACAGCGCCACCTCCACTATTCCAATATGGTAGTTCTCCATTGAATTTTAGAGGTAATTGGGAGATTTCCAGAAGGGATCTGCAAAGTCATCAGTTTATAACCATGTTTGCTGCTAATCGTGAATTCTCAGACACTGACTTGGAATATTCAGCCCCAACTACAGGGAGTCTGATCTGCTGTCGCATTGTTGCAGTTATTTTTATTACGCTTCTTGTTTTACGCCATACCCTTCCAATTATACTCAGTGGGGCAGGGGAATATTCATTGACCCTTTGTTTGTTACTGGTCTTGAGAACAGTTGGAATACTTCTCCCTGTTTGTATAATGGTTAAGGCATTTACTATAATCCAGCGGCGAAGACACCAGGATCATTTTCCCTCTAATCTACCACATGAGGAGAGTGTCTTGGGACAACCTGAATCTCGTGTCATTCATATTTTGTGA | 648 | 0.4105 | MDGENSSSLNKMVQCRICHDDDEDSNMEAPCSCCGSLKYAHRKCVQRWCNEKGDTICEICQQQFKPGYTAPPPLFQYGSSPLNFRGNWEISRRDLQSHQFITMFAANREFSDTDLEYSAPTTGSLICCRIVAVIFITLLVLRHTLPIILSGAGEYSLTLCLLLVLRTVGILLPVCIMVKAFTIIQRRRHQDHFPSNLPHEESVLGQPESRVIHIL | 215 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g0564 | 215 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 7 | 67 | IPR011016 | GO:0008270 | |
Dere01g0564 | 215 | Pfam | Protein of unknown function (DUF3675) | 66 | 180 | IPR022143 | - | |
Dere01g0564 | 215 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 7 | 191 | IPR033275 | - | |
Dere01g0564 | 215 | SMART | ringv_2 | 14 | 61 | IPR011016 | GO:0008270 | |
Dere01g0564 | 215 | FunFam | Zinc finger family protein | 3 | 70 | - | - | |
Dere01g0564 | 215 | SUPERFAMILY | RING/U-box | 12 | 65 | - | - | |
Dere01g0564 | 215 | CDD | RING_CH-C4HC3_MARCH | 15 | 61 | - | - | |
Dere01g0564 | 215 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 70 | IPR013083 | - | |
Dere01g0564 | 215 | Pfam | RING-variant domain | 15 | 60 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g0564 | Dere-ChrDere01 | 12271747 | 12274338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g0564 | 14 | 61 | C3H Transcription Factor Family | AT2G37950 | 49.020 | 1.31e-07 | 48.5 |