Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0527 ATGGCTGATATTGATTGCCATACTAATAAACCAATCGTTACAGCTTCTTCTTCCACTCCATCTCTGAAGCTCTTCGGCATCAACATTCACAACGTGTCAGAATCTGAGGTTCTGAACTCAGGTACAGATACCAGAAAGTACGAGTGCCAGTACTGTTGCCGTGAGTTCGCGAATTCGCAGGCACTGGGAGGCCATCAGAACGCTCACAAGAAAGAAAGGCAGCTTCTGAAGCGAGCTCAAATGCAAGCTGCTCGTACTGGCTTTGCTGCTTCACATAGTTATATGAATATCCACAACAGTCCAATCATATCTGGGTTCTCACCGCCGCCGCCGCCACCCAGCATTCTTGCCGGACCGCCGCCTCCTCCGCCATCTCCATGGCTGCACAGTGCTTCACATAATCCCTCCGCTTTGGTGTATCATTCAGGGGCATATGGCGTGTGTGCCCCTACTGGTTTTGGAGCAGCAGCAGGAGCTGCAGCTTTGCCTGATCATGCACATGCCCCACCTATAGCGGCGTTCGGTGGCTTTGTCGGCGGCGACGGCGGCAAACATGGCTTCGGTCTGGACTTGCATCTTAGTCTATGA 588 0.5238 MADIDCHTNKPIVTASSSTPSLKLFGINIHNVSESEVLNSGTDTRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTGFAASHSYMNIHNSPIISGFSPPPPPPSILAGPPPPPPSPWLHSASHNPSALVYHSGAYGVCAPTGFGAAAGAAALPDHAHAPPIAAFGGFVGGDGGKHGFGLDLHLSL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0527 195 PANTHER ZINC FINGER PROTEIN 5 7 195 IPR044299 GO:0010090
Dere01g0527 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Dere01g0527 195 Gene3D Classic Zinc Finger 28 100 - -
Dere01g0527 195 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Dere01g0527 195 SUPERFAMILY beta-beta-alpha zinc fingers 42 74 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0527 Dere-ChrDere01 11535490 11536077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0527 16 195 C2H2 Transcription Factor Family AT1G67030 42.079 4.89e-35 120