Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0522 ATGGCTCCATGGTCAACACTCGTAACCAAGCAGAAGAAGGTTGTCTTCATAATGGGCTCAACCGGCACCGGCAAAACCAAGCTTTCCGTCGGCCTCGGCACTCACTTCCCTTCTGGAATTATCAACTCCGACAAGATCCAAGTCTACAAAGGCCTAGACATCATCACCAACAAGATCCCAGAATCTGAGCGACGTGGGATCCCCCACCACCTTTTAGGAATCATCGACGATCCCGAACTCGACTTCACAGCCACCGATTTCTGCAACCACGTACTCGCGGCACTCGACCGCATCACCCAACATGGACAACTACCCATCATTGTGGGAGGATCCAACACCTACCTCGAATCCCTCGTGGAGGATCCTACCTACGAGTTTCGATCCAAATATGATTGCTGTTTCCTGTGGCTCGACGTTTCTCTCCCTGTTCTGTACCCATACTTGAGTAAGAGGGTCGATGAAATGGTGAAGGCAGGGCTTGTGGATGAGACGAGAGAGTATTTTGTGCCAGGAGCGAACTACTCTGTTGGGATTAGAAGAGCCATTGGGGTTCCTGAGCTTGACAAGTATTTTCAAGCTGAGAAGGATGGTGTTGTTAATGGTGATGAAGATTACAAAGAAAGGTTGCTCAGAGATGCTATTGATAGAATGAAAGAGAACACTTGTAAGTTGGCTCAAGTTCAGCTTCAGAAAATTCGAAGGCTGAATTATGAGCTTGGATGGGGAATGCATCGGATTGATGCTACTGAAGTGTTTGAGGCTGTTCTGAAGGGTGAAGGCTATGAATGTCTGTGGGAGGAGGTTGTGCTTAATCCCAGCATGGAGATTATCAAGAGATTTCTGGGGCATTGA 852 0.48 MAPWSTLVTKQKKVVFIMGSTGTGKTKLSVGLGTHFPSGIINSDKIQVYKGLDIITNKIPESERRGIPHHLLGIIDDPELDFTATDFCNHVLAALDRITQHGQLPIIVGGSNTYLESLVEDPTYEFRSKYDCCFLWLDVSLPVLYPYLSKRVDEMVKAGLVDETREYFVPGANYSVGIRRAIGVPELDKYFQAEKDGVVNGDEDYKERLLRDAIDRMKENTCKLAQVQLQKIRRLNYELGWGMHRIDATEVFEAVLKGEGYECLWEEVVLNPSMEIIKRFLGH 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0522 283 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 281 IPR039657 -
Dere01g0522 283 FunFam Adenylate isopentenyltransferase 5, chloroplastic 141 243 - -
Dere01g0522 283 Gene3D - 12 281 IPR027417 -
Dere01g0522 283 Pfam IPP transferase 127 234 - -
Dere01g0522 283 Pfam IPP transferase 47 121 - -
Dere01g0522 283 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 243 - -
Dere01g0522 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 168 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0522 Dere-ChrDere01 11453359 11454210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0522 128 281 C2H2 Transcription Factor Family AT2G27760 34.463 7.25e-22 92.8