Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0467 ATGGTGGTCCGAATAATCCAATCTCTGACACTCGCCGCCGTCTTCCTCGCCGCCATTTTCGCCGTCGCTGCCGACGACATCGTTCCTGGCAGTACTCTCCTGGCTTCCTTGCCAAATCAAGCATGGTCTTCTACGAACAACACTTTCTCTCTCAAGTTCGTTCCTTCCGATCCCCAAACTTCTCCTCCCTCCTTCACAGCCGCCATCGTCTACTCCGGCGGCACGCCCGTCATCTGGTCCGCCGGTAACGGCACAGCCGTGGACTCTGGCGGCTCCTTCCAATTCCTTTCCACTGGCGCCCTCCGCCTCGTAAACGGGTCGGGTTCGACCGTCTGGGACTCCGGAACTTCAAATCTGGATGTCTCCTCCGCCTCCCTACAAGACGACGGCAACCTCGTGCTCTCAAACAGAACCGCCACCGTCTGGTCCACATTCGACAATCCTACCGATACAATCGTTCCGTCTCAGAACTTCACTACCGATAAGTCTTTGCGATCTGGGTCTTACACATTTAATCTTCTTTCATCGGGAAATTTGACCCTTAAATGGAACGAGAGTATACAGTACTGGAATCAGGGTTTGAATGCATCTATGAATGCGAAGGTAAATTCGCCGGTTTTGCGGTTGCAACCAATAGGGCTTTTGCAACTTTATGATTCTAATCTGACCACTCCAGCTGTTGTTGCTTACAGTAGCGACTACGCTGAAGGTAGTGATGTGTTGAGAATTTTGAAGCTAGATAGTGATGGGAATTTGAGGATTTATAGTTCTTCTAGAGGTAGTGGTACTGCAACTGTGAGATGGGCTGCTGTAGAAGATCAATGTCAGGTTTTTGCTTATTGTGGAAGCTATGGGATTTGCAGTTACAACGATTCCAACCCGATTTGCGGTTGTCCATCTCAGAATTTTGAGATGATTGATCCGAATGACAGCCGAAAAGGGTGTAGAAGGAAGGTGAAACTTGATGATTGTCCTGGGAGTGCAACTATGTTGCAGTTGAATCATGCTCAGTTCTTGACTTATCCTCCTGAGCTTAGTACACAGATCTTTTTCATCGGTATATCAGCTTGTAGAGGTAATTGTCTTGCAGGTTCCTGCTTTGCTTCTACTTCGTTATCAGATGGCACAGGACAGTGTTACATAAAAACATCAGATTTTATCAGTGGATATCAGAGTCCTGCACTACCTAGCACTTCGTATGTCAAGGTTTGTGGACCTGTGTCTCCAAACCCACCACCCTCTCTGGATGAGGTTGGCAAGAAAGATCACCGGAGGGTACCAGCTTGGGTTGTGGTGGTAGTGGTTTTGGGCACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGTTTATGGTTCTGGTGTTGTAGGAACAGCCCAATATTAGGTGGATTATCTGCTCAATATTCTCTTCTTGAGTATGCTTCTGGCGCACCGGTCCAGTTCTCATACAAGGAGCTCCAGCGCTCAGCGAAAGGGTTTAAGGAAAAGCTTGGAGCTGGGGGTTTTGGTGCTGTCTATAGAGGAATCCTTGCCAATAAAACTGTTGTTGCAGTAAAGCAACTGGAGGGCATTGAGCAAGGGGAGAAACAGTTTAGGATGGAAGTTGCTACTATAAGCAGCACCCATCATCTCAATTTGGTGAGGCTGATTGGTTTCTGCTCAGAAGGGCGTCACAGGCTTCTGGTGTATGAGTTTATGAAAAATGGGTCTCTTGATAATTTTCTGTTTGTGACAGAAGAACAGTCAGGAAAATTGTTGAATTGGGAGTATAGATTCAACATCGCCCTAGGCACTGCAAGGGGCATCACATACCTTCATGAGGAATGTCGAGACTGCATTGTTCATTGTGATATAAAACCTGAAAACATTCTCTTAGACGAGAATTACATTGCCAAAGTCTCCGATTTCGGCCTTGCAAAGCTCATAAATCCGAAGGACCACAGACACAGAACTCTGACAAGTGTGAGAGGAACCCGAGGGTATTTAGCTCCCGAATGGCTTGCCAATCTACCCATAACTTCCAAGTCTGATGTTTACAGCTATGGTATGGTTTTGCTGGAGATTGTGAGTGGAAGGAGGAACTTCGATGTATTGGATGAAAGAAACCGGAAAAAGTTCTCCAATTGGGCTTTTGAAGAGTTTGAGAAAGGCAATATCAAGGGAATTATTGACAGAAGACTGGATGACCAAGAAGTTGATATGGAACAAGTGAAGAGGGCGATTCAGGTAAGCTTCTGGTGCATCCAGGAGCAGCCATCTCAGAGGCCAACAATGGGCAGAGTCGTGCAAATGCTCGAAGGGGTAACTGAGATCGAGAAGCCTCCTGCCCCGAAATCCTCGACTGAAGGATCTGTTGGTGGAACAAGCACATGCTTGAGTAGCAATGCCAGCGCCTTCTCCACCATTGCAGCCTCACCTCCAGGTCAATCTTCGTCTTCTTCATTCCAGAATAGCGGTGTTTCAAGTTTGACTTCAGGAAAGAACACTGAGAAGGCAACTTCCTCCCTTCTGCAATCGGAACCATAG 2523 0.4713 MVVRIIQSLTLAAVFLAAIFAVAADDIVPGSTLLASLPNQAWSSTNNTFSLKFVPSDPQTSPPSFTAAIVYSGGTPVIWSAGNGTAVDSGGSFQFLSTGALRLVNGSGSTVWDSGTSNLDVSSASLQDDGNLVLSNRTATVWSTFDNPTDTIVPSQNFTTDKSLRSGSYTFNLLSSGNLTLKWNESIQYWNQGLNASMNAKVNSPVLRLQPIGLLQLYDSNLTTPAVVAYSSDYAEGSDVLRILKLDSDGNLRIYSSSRGSGTATVRWAAVEDQCQVFAYCGSYGICSYNDSNPICGCPSQNFEMIDPNDSRKGCRRKVKLDDCPGSATMLQLNHAQFLTYPPELSTQIFFIGISACRGNCLAGSCFASTSLSDGTGQCYIKTSDFISGYQSPALPSTSYVKVCGPVSPNPPPSLDEVGKKDHRRVPAWVVVVVVLGTLLALIAFEGGLWFWCCRNSPILGGLSAQYSLLEYASGAPVQFSYKELQRSAKGFKEKLGAGGFGAVYRGILANKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVTEEQSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYIAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVLDERNRKKFSNWAFEEFEKGNIKGIIDRRLDDQEVDMEQVKRAIQVSFWCIQEQPSQRPTMGRVVQMLEGVTEIEKPPAPKSSTEGSVGGTSTCLSSNASAFSTIAASPPGQSSSSSFQNSGVSSLTSGKNTEKATSSLLQSEP 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0467 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 148 270 - -
Dere01g0467 840 Pfam S-locus glycoprotein domain 234 299 IPR000858 GO:0048544
Dere01g0467 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 193 IPR036426 -
Dere01g0467 840 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Dere01g0467 840 Gene3D - 148 270 IPR036426 -
Dere01g0467 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 147 - -
Dere01g0467 840 SUPERFAMILY Protein kinase-like (PK-like) 471 765 IPR011009 -
Dere01g0467 840 PANTHER OS07G0415500 PROTEIN 6 776 - -
Dere01g0467 840 CDD STKc_IRAK 496 766 - -
Dere01g0467 840 Pfam Protein kinase domain 493 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0467 840 ProSiteProfiles Protein kinase domain profile. 490 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0467 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 156 257 IPR036426 -
Dere01g0467 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Dere01g0467 840 FunFam S-receptor-like serine/threonine-protein kinase 464 564 - -
Dere01g0467 840 Gene3D - 20 146 IPR036426 -
Dere01g0467 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 774 - -
Dere01g0467 840 PIRSF SRK 1 822 IPR024171 GO:0004674
Dere01g0467 840 MobiDBLite consensus disorder prediction 768 840 - -
Dere01g0467 840 MobiDBLite consensus disorder prediction 780 840 - -
Dere01g0467 840 CDD B_lectin 36 148 IPR001480 -
Dere01g0467 840 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0467 840 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Dere01g0467 840 Gene3D Phosphorylase Kinase; domain 1 464 564 - -
Dere01g0467 840 Pfam D-mannose binding lectin 77 163 IPR001480 -
Dere01g0467 840 Gene3D Transferase(Phosphotransferase) domain 1 565 781 - -
Dere01g0467 840 ProSiteProfiles Bulb-type lectin domain profile. 149 267 IPR001480 -
Dere01g0467 840 SMART blect_4 33 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0467 Dere-ChrDere01 10293398 10295920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0467 463 774 Receptor kinase-like Gene Family AT5G20050 44.000 2.56e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere01g0467 Pkinase 5.5e-52 CL0016