Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0460 ATGGCTACTAAGCCCAACGACACCAGCCCCACTAAACCTTCTTCTCTTCATGTTGAACCTGCAGCCTCCCCGCCGGACCCTAGTCCTCTTCGCAAGATTATCGTCGTTGCCTCCATTGCCGCCGGCATCCAGTTCGGCTGGGCTCTCCAGCTCTCCTTGCTCACTCCCTATGTCCAGCTTCTGGGAATTCCGCACACTTGGGCTGCCTTCATTTGGCTCTGTGGTCCAATCTCCGGCATGCTGGTTCAACCCATTGTCGGTTACCACAGTGACCGATGCACCTCTCGGTTCGGCCGCCGTCGGCCTTTCATCGCCGCCGGATCGCTGGCCGTTGCCATCGCTGTGTTCCTGATCGGTTACGCCGCCGATCTCGGTCACATGTTCGGCGACAATCTCGAGAAGAAGACGCGGCCGCGCGCCATCGTGGTATTCGTCGTCGGGTTCTGGATCCTTGACGTGGCCAACAATATGCTGCAAGGTCCGTGCCGGGCGCTGTTGGCCGACCTCTCTGCCGGCGACCAACGGAAGACGCGAACAGCGAACGCGTTCTTTTCGTTCTTCATGGCCGTCGGAAACGTCCTCGGCTACGCCGCCGGGGCCTACAGCAAGCTCCACAACATCTTCCCCTTCACGTTAACCAAAGCCTGCGACGTCTACTGCGCCAACTTGAAAAGCTGCTTCTTCCTCTCCATCGCCCTGCTCGCCATTCTCGCCACCGCCGCTCTCACCTACGTGAAGGAGAAGACGTTTCAGTCGCCGAAAGCAGCTGGCGGGACCGAGGCGGATGATACGGTGAGTGAGGGATCAGGAGGCTTACCGTGCTTCGGACAGATGTTCGGTGCCTTCCGTGAGCTCAAGAAGCCCATGTGGATTCTTCTCCTGGTGACGTGTCTCAATTGGATTGCTTGGTTCCCCTTCTTGTTGTTTGACACTGATTGGATGGGGAGGGAGGTGTACGGTGGGACCGTCGGGGAAGGTAAGGCGTACGATAGAGGCGTGCGCGCGGGTGCACTGGGGCTCATGCTGAACTCGGTGGTGCTCGGCGTCGTGTCGCTGGGAATGGAGGTGTTAGCGCGTGGCGTTGGTGGCGTGAAGAGGTTATGGGGAATTGTGAACTTCTTGCTCGCCGCGTGTTTGGCCCTTACGGTGTTGATCACCAAGATGGCCGAGCACTCACGGCGGTTTGCCCCCGGCTCCACCGACCCTCTGCCACCCCCCGGCGGCGTCAAGGCCGGTGCCTTGGCTCTCTTTGCGGTGCTCGGAGTCCCCCTTGCGATCACTTACAGTATCCCTTTTGCTCTTGCATCAATATTCTCCAGCTCCTCAGGGGCAGGCCAAGGGTTATCTTTGGGAGTTCTCAACCTTGCAATTGTCGTGCCACAGATGGTGGTCTCTGTGGTGAGTGGACCATGGGATGCATTGTTTGGTGGTGGAAACTTACCGGCCTTCGTGGTGGGTGCCATTGCGGCCGCTGGCAGTGGCATACTATCGATCGTGCTACTGCCGTCTCCACCACCAGAGTTGGCCAAGGCGGCGACGGCGGCAGGGGGAGGCTTCCATTAG 1563 0.5937 MATKPNDTSPTKPSSLHVEPAASPPDPSPLRKIIVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSLAVAIAVFLIGYAADLGHMFGDNLEKKTRPRAIVVFVVGFWILDVANNMLQGPCRALLADLSAGDQRKTRTANAFFSFFMAVGNVLGYAAGAYSKLHNIFPFTLTKACDVYCANLKSCFFLSIALLAILATAALTYVKEKTFQSPKAAGGTEADDTVSEGSGGLPCFGQMFGAFRELKKPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDRGVRAGALGLMLNSVVLGVVSLGMEVLARGVGGVKRLWGIVNFLLAACLALTVLITKMAEHSRRFAPGSTDPLPPPGGVKAGALALFAVLGVPLAITYSIPFALASIFSSSSGAGQGLSLGVLNLAIVVPQMVVSVVSGPWDALFGGGNLPAFVVGAIAAAGSGILSIVLLPSPPPELAKAATAAGGGFH 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0460 520 CDD MFS_SLC45_SUC 33 496 - -
Dere01g0460 520 SUPERFAMILY MFS general substrate transporter 31 505 IPR036259 -
Dere01g0460 520 MobiDBLite consensus disorder prediction 1 26 - -
Dere01g0460 520 NCBIfam sucrose/proton symporter 29 505 IPR005989 GO:0005886|GO:0008515|GO:0015770
Dere01g0460 520 Gene3D MFS general substrate transporter like domains 27 513 IPR036259 -
Dere01g0460 520 MobiDBLite consensus disorder prediction 1 16 - -
Dere01g0460 520 FunFam Sucrose transport protein 27 501 - -
Dere01g0460 520 Pfam MFS/sugar transport protein 42 301 - -
Dere01g0460 520 PANTHER SUGAR TRANSPORTER 30 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0460 Dere-ChrDere01 10144740 10147023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0460 1 520 Sucrose Transporter Gene Family AT1G22710 66.540 0.0 693