Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0458 ATGGCTGCGAAGCAGAACCATACAAAGCCTTCTTCTCCTCACGTTGAACCACCTGCCTCCCTGCCGGAGCCCAGCCCTCTTCGCAAAATCATCGTCGTCGCCTCCATTGCCACCGGAATCAATTTCGGATGGGCTCTTCAGCTTTCCCTACTAACTCCCTATGTCCAGCTTCTCGGTACACCCCACTTCTGGGCTTCCTTCATATGGCTGTGTGGTCCAGTCTCCGGCTTGTTGGTTCAACCCGTTGTCGGTTACCACAGTGACCGCTGCACCTCCCATTTCGGTCGCCGTCGCCCGTTCATCGCCGCCGGCTCACTCTCCGTTGCCATTGCTGTCTTCTTGATCGGTTACTCCGCCGATCTCGGCCACATGATAGGCGACTCACTTGACAAGAAAACGCGGCCGCGCTCCATCGCGATCTTCGTCGTCGGGTTCTGGATCCTCGACGTGGCCAACAACATGCTACAAGGCCCATGCCGGGCTCTACTGGCCGACCTCTCCGCCGGAGACAACCGCAAGACGCGCACGGCCAACTCGTTCTTCTCGTTCTTCATGGCCGTCGGAAACGTCCTGGGCTACGCCGCTGGATCCGGCGGCAAGCTTCACAACATCTTCCCCTTCACCCAAACCAAAGCCTGCAACGAGTACTGCGCCAACATGAAGAGCTGCTTCTTCATCTCCATCGCTCTTCTCTTGTTCCTCACAACCATCGCTCTCACCTACGTGAAGGAGAAGACGTCTCCGTCGCAAAAAGGAGCTGGCGGGGACGAGGGGGATGATGCAGTGAGCGAAGGAGCAGGAGGCTTACCGTGCTTCGGACAAATGCTCGGAGCTTTCCGCGAGCTCAAGAGGCCGATGTGGATTCTACTCCTGGTGACATGTCTCAATTGGATTGCATGGTTTCCGTTCTTGATGTTCGACACTGATTGGATGGGGAAGGAGGTGTACGGAGGGAAGGTCGGAGAAGGTAAGGCGTTCGCCATGGGAGTGCATGCGGGTGCACTGGGCTTGATGCTGAACTCGGTGGTGCAGGGAGTGGTCTCGTTGGGAGTGGAGGTGTTGGCCCGTGGAGTTGGCGGCGTGAAGAGGCTATGGGGTATCGTCAACTTCTTGCTTGCGGCGTGTCTGGCTTCGACGGTGTTGATCACCAAGATGGCGGAGCACTCACGGCGGTTCGCCGCCGGCAGCCACGAGCCGCTTCCACCTCCGGCCGGAGTTAAGGCTGCCGCCTTGTCTCTCTTTGCGGTGCTCGGAATTCCCCTGGCGATTACTTACAGTATTCCTTTTGCTCTTGCATCAATATTCTCCAACTCCTCAGGGGCTGGCCAAGGGTTATCTTTGGCCGTTCTCAACCTTGCAATTGTCATACCACAGATGTTTGTGGCTGTGGTGAATGGACCATGGGATGCTCTGTTTGGTGGGGGTAACTTGCCGGCATTTGTGGTCAGTGCGGTGGCAGCGGCGGCCAGCGGCATACTATCGATGGTCTTGCTGCCGTCACCTCCGCCAGACTTGGCCAAGGCGGCCACTGCCACCGCCGGAGGGTTTCATTAG 1554 0.5779 MAAKQNHTKPSSPHVEPPASLPEPSPLRKIIVVASIATGINFGWALQLSLLTPYVQLLGTPHFWASFIWLCGPVSGLLVQPVVGYHSDRCTSHFGRRRPFIAAGSLSVAIAVFLIGYSADLGHMIGDSLDKKTRPRSIAIFVVGFWILDVANNMLQGPCRALLADLSAGDNRKTRTANSFFSFFMAVGNVLGYAAGSGGKLHNIFPFTQTKACNEYCANMKSCFFISIALLLFLTTIALTYVKEKTSPSQKGAGGDEGDDAVSEGAGGLPCFGQMLGAFRELKRPMWILLLVTCLNWIAWFPFLMFDTDWMGKEVYGGKVGEGKAFAMGVHAGALGLMLNSVVQGVVSLGVEVLARGVGGVKRLWGIVNFLLAACLASTVLITKMAEHSRRFAAGSHEPLPPPAGVKAAALSLFAVLGIPLAITYSIPFALASIFSNSSGAGQGLSLAVLNLAIVIPQMFVAVVNGPWDALFGGGNLPAFVVSAVAAAASGILSMVLLPSPPPDLAKAATATAGGFH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0458 517 NCBIfam sucrose/proton symporter 26 503 IPR005989 GO:0005886|GO:0008515|GO:0015770
Dere01g0458 517 SUPERFAMILY MFS general substrate transporter 28 502 IPR036259 -
Dere01g0458 517 MobiDBLite consensus disorder prediction 1 22 - -
Dere01g0458 517 CDD MFS_SLC45_SUC 30 477 - -
Dere01g0458 517 PANTHER SUGAR TRANSPORTER 27 497 - -
Dere01g0458 517 Pfam MFS/sugar transport protein 43 297 - -
Dere01g0458 517 FunFam Sucrose transport protein 24 498 - -
Dere01g0458 517 Gene3D MFS general substrate transporter like domains 27 252 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0458 Dere-ChrDere01 10137793 10139849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0458 20 517 Sucrose Transporter Gene Family AT1G22710 65.675 0.0 658