Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0446 ATGGTTGCCACGGAGAATAACTACGATGCTTGTCTTGATGCATTGTGGCTATCTACTGGTCAGGTGTACCCTGCAGTGCTGAATTCTGCGATTGAGCTAAACCTATTTGCAATCATTAGCCAAGGAAGCCCTAAGGGTATGTCTCCCTCTGAAATTGCCTCTAGGCTTCCTACTCAGCATCCAGACACTCCCCAGAGGCTCGATCGTGTGCTGTTTTTGCTTGCGAGTCACTCTCTTCTGACTTGGTCTAAGCGAGTAGATGAAGAAGGAGAGGTTGAGAGAGTGTATGGACTCTCTCCCACAGGTAAGTACTTGATCGCTGACGATGATGGAGCTTCCTACGCTGCACTCTCAAGATTGTGCTGTCACCCTGCCTATGTAGCAGTTTTGAAAAATTTCAAGGAAGTGATCATTGACGATGAAGAGGACTTGTTTAAGAAAGTGCATGGGAAGCCTTTGTTCGAATACATGGAAACAGACCTGACATTTAAACCTTTGTTTCACAAAGCAATGGCTGACATTGCTGCCATGCATATGAGGCGGATTCTTGAAACATACAAAGGATTTGAGGGAATATCAACACTTGTTGACGTGGCTGGTGGTATTGGCCAAAGCCTCAAAATGATCACCACTAAGCACCCTTCAATTAAAGGCATCAACTTCGATTTGCCCCAAGTGCTCAAACATGCTCCATCCTACCCAGGAGTTAAGCATGTTGGAGGAGATATGTTCCAAAGTGTTCCAGAAGGTGATGCAATAATGATCAAGGCTACTACCCATAACTGGACTGATGAAAAATGCATACAAATTCTGAAGAACTGCCACAAATCCCTAAGGAAAGGTGGGAAAGTAATAATTATAGACTTGATAGTGCCAGAAATTCCAAAGGATAGTGATGGTGATAAGTATGTTTCCATTCTTGACAATGCCATGTTTCTCCTAGCTGGTGGAAAGGAAAGAACAGAGAAAGAATTTGCAGTTCTGTGCAAAGGTGCTGGGTTTTCTAGATATGAAATTGCCTGTTGTGTTTTCTCAAGTTTGGGAGTCATTGAGTTTTATAAATAA 1065 0.431 MVATENNYDACLDALWLSTGQVYPAVLNSAIELNLFAIISQGSPKGMSPSEIASRLPTQHPDTPQRLDRVLFLLASHSLLTWSKRVDEEGEVERVYGLSPTGKYLIADDDGASYAALSRLCCHPAYVAVLKNFKEVIIDDEEDLFKKVHGKPLFEYMETDLTFKPLFHKAMADIAAMHMRRILETYKGFEGISTLVDVAGGIGQSLKMITTKHPSIKGINFDLPQVLKHAPSYPGVKHVGGDMFQSVPEGDAIMIKATTHNWTDEKCIQILKNCHKSLRKGGKVIIIDLIVPEIPKDSDGDKYVSILDNAMFLLAGGKERTEKEFAVLCKGAGFSRYEIACCVFSSLGVIEFYK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0446 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Dere01g0446 354 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Dere01g0446 354 Gene3D - 2 105 IPR036388 -
Dere01g0446 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 354 IPR016461 GO:0008168
Dere01g0446 354 Gene3D Vaccinia Virus protein VP39 106 354 IPR029063 -
Dere01g0446 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 110 IPR036390 -
Dere01g0446 354 Pfam O-methyltransferase domain 134 335 IPR001077 GO:0008171
Dere01g0446 354 PANTHER O-METHYLTRANSFERASE 17 344 IPR016461 GO:0008168
Dere01g0446 354 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Dere01g0446 354 PIRSF O-mtase 2 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0446 Dere-ChrDere01 9932566 9934679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0446 9 354 Monolignol Biosynthesis Gene Families AT5G54160 47.989 1.72e-106 315