Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0444 ATGGTTGCCACAGAGAATAACTACGATGCATGTCTTGATGCATTGTGGATACCTAGTGGTCAGGTGTACCCTGCAGTGCTGAATTCTGCGATTGAGCTAAACCTATTTGAAATCATTAGCCAAGGAAGCCCTAAGGGTATGTTTCCCTCTGAAATTGCCTCTAGGCTTCCTACTCAGAATCCAGACACTCCCCAGAGGCTCGATCGTGTGCTGTTTTTGCTTGCGAGTTACTCTCTTCTGACTTGGTCTGTGCGAGTAGATGAAGAAGGAGAGGTTGAGAGAGTGTATGGGCTCTCTCCCACAGGTAAGTACTTGATCGCTGACGATGAAGGAGCTTCCTACGCTGCACTCTCTAGATTGTGCTGTCACCCTGCCTATGTAGCATTTTTGCAGAATTTCAAGGAAGTAATTTTGGACGATGAAGAGGATTTGTTTAGGAAAGTGCACGGGATGTCTATGTTCGAATATATGGAGACGGATCCAACATTTAAGCCCTTGTTCCATAAGGCAATGGCTGATGTATCTACAATGCATATGAGACAGATTCTTGAGACATACAAAGGGTTCGAGGGAATATCAACACTTGTTGATGTGGCTGGTGGTATTGGCCAAAGCCTCAAAATGATCATCGCTAAGTATCCTTGTATAAAGGGCATTAACTTTGACTTGCCCCAAGTGGTACAGCATGCCCCATTCCACCCAGGAGTTAAGCATGTTGGAGGAGATATGTTCCAAAGTGTTCCAGAAGGTGATGCAATAATGATCAAGGCTACTACCCATAACTGGACTGATGAAAAATGCATACAAATTCTGAAGAACTGCCACAAATCCCTAAGGAAAGGTGGGAAAGTAATAATTATAGACTTGATAGTGCCAGAAATACCAAAGGATAGTGATGGTGATAAGTATGTTTCCATTCTTGACAATGCCATGTTTCTCCTAGCTGGTGGAAAGGAAAGAACAGAGAAAGAATTTGCAGTTCTGTGCAAAGGTGCTGGGTTTTCTAGATATGAAATTGCCTGTTGTGTTTTCTCAAGTTTGGGAGTCATTGAGTTTTATAAATAA 1065 0.4282 MVATENNYDACLDALWIPSGQVYPAVLNSAIELNLFEIISQGSPKGMFPSEIASRLPTQNPDTPQRLDRVLFLLASYSLLTWSVRVDEEGEVERVYGLSPTGKYLIADDEGASYAALSRLCCHPAYVAFLQNFKEVILDDEEDLFRKVHGMSMFEYMETDPTFKPLFHKAMADVSTMHMRQILETYKGFEGISTLVDVAGGIGQSLKMIIAKYPCIKGINFDLPQVVQHAPFHPGVKHVGGDMFQSVPEGDAIMIKATTHNWTDEKCIQILKNCHKSLRKGGKVIIIDLIVPEIPKDSDGDKYVSILDNAMFLLAGGKERTEKEFAVLCKGAGFSRYEIACCVFSSLGVIEFYK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0444 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 354 IPR016461 GO:0008168
Dere01g0444 354 CDD AdoMet_MTases 194 291 - -
Dere01g0444 354 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Dere01g0444 354 Pfam O-methyltransferase domain 133 335 IPR001077 GO:0008171
Dere01g0444 354 PANTHER O-METHYLTRANSFERASE 19 344 IPR016461 GO:0008168
Dere01g0444 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 352 IPR029063 -
Dere01g0444 354 PIRSF O-mtase 2 354 IPR016461 GO:0008168
Dere01g0444 354 Gene3D - 2 105 IPR036388 -
Dere01g0444 354 Gene3D Vaccinia Virus protein VP39 106 354 IPR029063 -
Dere01g0444 354 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Dere01g0444 354 SUPERFAMILY "Winged helix" DNA-binding domain 7 109 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0444 Dere-ChrDere01 9718199 9784419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0444 9 354 Monolignol Biosynthesis Gene Families AT5G54160 50.287 1.07e-112 330