Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0442 ATGGGTTCCATTTCCAGTGAGAATGAGAATAAGGGGTTGGGAATAGCTAAATCCTGTTCCCAAACAGATCAGGACGAGGCTTGCCTCTCCGCCATGTTTCTGACAACCAACCAGGTCTATCCAGCTGTCCTCAACGCAGCCATTGATCTCAACCTCTTCGACATCATAGCCAATAAGGCCTCGACACCTGGTTCCCCTATGTCGGCGCGTGAAATCGCCTCCCATCTTCCCTCCCAGCACCCTGACATGCCCGATCGCCTGGAACGCATGCTGCGTCTGCTGGCCAGCTACACCCTCCTCACGTGCTCCTCACGTGCCAACGAAACTGTCTATGCTCTTTCCCCTGTTGGCAAATACTGCGTCACTGACGAAACCGGAGGCTACTTGGCTTCCTTCACCACCTTCCTCTGTCACAAAGCACTCTTACAGATTTGGATGAATTTCAAGGAAGCAGTGGTGGATCCGGACATTGATCTGTTCAAGAAGGTTCATGGAAAAACAAGTTACGAGTACTTCGGGACGGACCCGAAGTTGAACCACATATTCAACAAAGCAATGGCAGACTGTGCCATAACTGGTCGGACGAGAAATGCATAG 597 0.5126 MGSISSENENKGLGIAKSCSQTDQDEACLSAMFLTTNQVYPAVLNAAIDLNLFDIIANKASTPGSPMSAREIASHLPSQHPDMPDRLERMLRLLASYTLLTCSSRANETVYALSPVGKYCVTDETGGYLASFTTFLCHKALLQIWMNFKEAVVDPDIDLFKKVHGKTSYEYFGTDPKLNHIFNKAMADCAITGRTRNA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0442 198 SUPERFAMILY "Winged helix" DNA-binding domain 24 124 IPR036390 -
Dere01g0442 198 PANTHER O-METHYLTRANSFERASE 31 188 IPR016461 GO:0008168
Dere01g0442 198 Gene3D - 8 120 IPR036388 -
Dere01g0442 198 FunFam Caffeic acid 3-O-methyltransferase 10 120 - -
Dere01g0442 198 Gene3D Vaccinia Virus protein VP39 121 195 IPR029063 -
Dere01g0442 198 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 198 IPR016461 GO:0008168
Dere01g0442 198 Pfam Dimerisation domain 43 95 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0442 Dere-ChrDere01 9582429 9584334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0442 21 188 Monolignol Biosynthesis Gene Families AT5G54160 41.618 1.96e-39 136