Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0441 ATGGGTTCCATTTCCAGTGAGAATGGGAATAAGGGGTCGGGGACAGCAAATTCCTGTGCCCAAACAGAGGACGAGACTTGCCTCTCCGCCATGTTTCTGACAACCAACCAGGTCTATCCAGCTGTCCTCAACGCAGCCATTGATCTCAACCTCTTCGACATCATAGCCAATAAGGCCTCGCCACCTGGTTCCCCCATGTCGGCGCGTGAAATCGCCTCCCATCTTCCCTCCCAGCACCCTGACATGCCCGATCGCCTGGAACGCATGCTGCGTCTGCTGGCCAGCTACACCCTCCTCACGTGCTCCTCACGTGCCAATGAAACTGTCTATGCCCTTTCGCCTGTTGGTAAATACTGTGTCACAGACGAGACAGGAGGCTACTTGGCTTCCTTCACCACCTTCCTCTGTCACAAGGCACTCTTACAGATTTGGATGAATTTCAAGGAAGCAGTGGTGGATCCAGACATCGACCTGTTCAAGAAGGTTCATGGAAAAACAAGTTACGAGTACTTCGGGACGGATCCGAAGTTGAACCACATATTCAACAAAGCAATGGCGGACGTATAACAGGAAGAGCTATAA 582 0.5189 MGSISSENGNKGSGTANSCAQTEDETCLSAMFLTTNQVYPAVLNAAIDLNLFDIIANKASPPGSPMSAREIASHLPSQHPDMPDRLERMLRLLASYTLLTCSSRANETVYALSPVGKYCVTDETGGYLASFTTFLCHKALLQIWMNFKEAVVDPDIDLFKKVHGKTSYEYFGTDPKLNHIFNKAMADVXQEEL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0441 193 Pfam Dimerisation domain 42 94 IPR012967 GO:0046983
Dere01g0441 193 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 193 IPR016461 GO:0008168
Dere01g0441 193 Gene3D Vaccinia Virus protein VP39 120 193 IPR029063 -
Dere01g0441 193 SUPERFAMILY "Winged helix" DNA-binding domain 23 123 IPR036390 -
Dere01g0441 193 FunFam Caffeic acid 3-O-methyltransferase 9 119 - -
Dere01g0441 193 Gene3D - 8 119 IPR036388 -
Dere01g0441 193 PANTHER O-METHYLTRANSFERASE 30 188 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0441 Dere-ChrDere01 9565456 9566971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0441 22 187 Monolignol Biosynthesis Gene Families AT5G54160 41.520 4.15e-39 135