Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0433 ATGACATCACCCCAATTTTCTATTCATTACACCAATCCAAGCCTGACATATGCATATTTCGATCGGCTTTTGTCAACTCATCAAGTAGTGATTGTGTCCTCCATTAACAAGTCTGAAAACAAGGAGAGATCATCAATGGCGGACATGGAATCGTGTGTACCACCAGGATTTAGATTTCATCCAACAGAGGAAGAACTTGTGGGATATTATCTCAAGAGGAAGATCAACTCACTCAAAATCAACCTAGACGTTATTGTTGAGCTAGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTACTTTTTCAGCCACAAGGACAAGAAGTATCCGACAGGAACAAGAACAAACAGAGCAACAGCTGCAGGGTTCTGGAAAGCAACAGGAAGGGACAAGGCAGTGATGTCCAAAAACGGAATCATAGGAATGAGGAAGACCCTTGTCTTCTACCAGGGACGTGCCCCTAATGGCAGGAAATCTGACTGGATTATGCATGAATATCGCCTCCAAACTTCTGACCATGCCCCTCCTCAGGAAGATGGATGGGTAGTGTGCCGAGCATTCAAAAAGCCAAGTCCTAGCCATGTGAGGCAAGGCTTTGAAGCACAGTGCTATTTGAGAGAGCAAATTAGCCACGCAAGGCCTTTCTCTTCATTCTCAGATATCCTGAATCAAACCCATCATCGTGATCTGCTAACACATCCTAATAATACTTCTCAAGCTACAAGTTTTAGTCCTCATCAACCCTTCATTAGCTTGGAGCAGCACCAGCTTGTTGATCTTCCTCAACTAGATAGCCCTTGCACTGCTTCTCTTACACCAGCAAATCTGGGAATAAGATCTTCAGATCATGGCCAGAACAGTATCAATGGCGAAGAATATTACAGTGACGTGGAAAGCTTGGACAACTTGCTTGCTTCAAATGTGACAGATACTTCTGTTTCTTTCTTTGCACATTCGAACTTGCCCATGATCATACCCTACGGCAATGAACTAGTACAACCTCATAATCAAGCTAGCCATGTCCTAGGATGCTTTCCTGATTTATAG 1086 0.4355 MTSPQFSIHYTNPSLTYAYFDRLLSTHQVVIVSSINKSENKERSSMADMESCVPPGFRFHPTEEELVGYYLKRKINSLKINLDVIVELDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNGIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQTSDHAPPQEDGWVVCRAFKKPSPSHVRQGFEAQCYLREQISHARPFSSFSDILNQTHHRDLLTHPNNTSQATSFSPHQPFISLEQHQLVDLPQLDSPCTASLTPANLGIRSSDHGQNSINGEEYYSDVESLDNLLASNVTDTSVSFFAHSNLPMIIPYGNELVQPHNQASHVLGCFPDL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0433 361 SUPERFAMILY NAC domain 45 202 IPR036093 GO:0003677|GO:0006355
Dere01g0433 361 ProSiteProfiles NAC domain profile. 53 202 IPR003441 GO:0003677|GO:0006355
Dere01g0433 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 50 259 - -
Dere01g0433 361 FunFam NAC domain-containing protein 62 206 - -
Dere01g0433 361 Pfam No apical meristem (NAM) protein 54 181 IPR003441 GO:0003677|GO:0006355
Dere01g0433 361 Gene3D NAC domain 62 205 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0433 Dere-ChrDere01 9473137 9477392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0433 49 360 NAC Transcription Factor Family AT1G71930 55.891 1.23e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g0433 NAM 1.1e-36 No_clan