Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0425 ATGCCAACTCCAACAGCTTCAACTTCACCAACACCAAACGCCGCGTTTGGTGCAAGAGAATATCCCAATGCAAACTCCTCCGGAACAGCCTCTCCTCCCAAACACGGCCCTCGAGAGTCGCATGACCTTCCTTCTTTATTGTCTTCCTCTTATCCAATCACTCTCAAGTTCGTGGACGTGGGATACCGAGTGAAGATAGATGCCAAGCAAGGAGGGAGCAGCATAAAGCGAATGTTCGCCTCGCCGCCTTCGGATGGGAGATCAACGGCGCAGGAGAGGACGATACTGAACGGTGTAACGGGGATGGTGTCGCCGGGAGAAATCCTCGCAGTCCTTGGCCCGTCGGGGAGCGGGAAATCGACGCTCCTGAACGCACTGGCGGGAAGGCTTCAAGGACACGGTCTCACCGGAATAATCCTTGCGAACGGATCCAAACTCACCAAGTCGGTTGTCCGCCGAACGGGGTTCGTGACGCAGGACGACGTCCTCTACCCTCACCTCACCGTGCGCGAGACCTTGATCTTCTGCTCGCTGCTTCGTCTCCCTAGGACGCTATCGAAAGCGGAGAAGATCGCCGTGACGGAGACGGTTATCGCGGAGTTGGGGCTGGTGAAATGCGAGAACACCATAATCGGGAACGCCTATATTCGGGGGGTTTCGGGAGGAGAGAGGAAGCGAGTGAGTATAGCTCACGAGATGTTGGTGAACCCGAGCTTGCTGATACTGGACGAGCCGACTTCGGGGCTGGACTCCACGGCGGCGCATCGGCTGGTGACGACGCTGGGGACGCTGGCTCAGCAGAAGGGGAAGACGGTGGTGGCGTCGATGCACCAGCCGTCGAGCCGAGTGTACCAGATGTTCGATAAGGTGTTGGTGTTGTCGGAAGGGCAGTGCTTGTACTTCGGGAAGGGGAGCCGAGCTATGAGTTACTTTGAGTCGGTTGGCTTCAAGCCGTCTTTCCCCATGAACCCCGCCGATTTTCTGCTTGATCTCGCAAACGGTGTTTGTCAAGTGGACAATACAAGTGAAAGAGACAGGCCAAACATAAAGCAAACCCTAGTTCACTCCTATAACACAATTTTAGCTCCTAGGATAAAAGATGCAATGCAAAACATGGACACTCCTACAAAAGAAACTCATCATCATCCTCTAGAAATCACCTCCAAAGAACGTAGATACAGTAACAAGAACAACAGAATCACTCTCTCTGACTGGTTTAACCAATTCACCATTCTGCTCCAAAGAAGCCTCAAAGAAAGAAAGCACGAGTCCTTCAACCGCCTCCGAGTCTTCCAAGTCATCGCCGCCTCCCTCCTCGCCGGCCTAATGTGGTGGCACTCCGACTTCCGGGACGTCCAGGACCGCCTCGGCCTCCTCTTCTTCATCTCCATCTTCTGGGGCGTCTTCCCGTCCTTCAACTCCGTCTTCGCCTTCCCTCAAGACCGAGCCATCTTCATGAAGGAGCGAGCCTCTGGTATGTACACACTCTCATCTTACTTCATGGCCCGTATCGTCGGCGACCTCCCCATGGAGCTCCTCCTCCCCTTCATCTTCCTCACCTTGACTTACTGGATGGGCGGGCTCAGGCCCGACCCATGGGCTTTCGTCCTCACCGTGCTAGTGGTTTTGGGCTATGTGCTCGTCTCTCAAGGGCTCGGGCTTTTCCTCGGAGCTGCAATAATGGACTCCAAGCAGGCCTCCACCGTGGCGGCGGTGGTAATGCTGGCGTTCGTTCTGATCGGAGGGTATTACGTGCACAAGGTGCCTTCATGTATGAGCTGGCTTAAGTATATGTCCTCAACTTTTTACTGTTATAGGCTTCTGATCAATATCCAGTATGGTGATGGGAAGAGAATATCAGAGTTTCTTGGTTGCTCTAATGGCGTGCTCAGTGATAGAGGAAGCTGCAAGTTTGTGGAAGAAGATGTGGTGGGCCAAATAAGCCCGTTGGGAAGCATTGGGGCTTTGTTTATAATGTTTGTGGGGTATAGGGTGTTGGCTTACTTTGCATTGAGGAAAATCAAGGGTTAA 2031 0.5347 MPTPTASTSPTPNAAFGAREYPNANSSGTASPPKHGPRESHDLPSLLSSSYPITLKFVDVGYRVKIDAKQGGSSIKRMFASPPSDGRSTAQERTILNGVTGMVSPGEILAVLGPSGSGKSTLLNALAGRLQGHGLTGIILANGSKLTKSVVRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRTLSKAEKIAVTETVIAELGLVKCENTIIGNAYIRGVSGGERKRVSIAHEMLVNPSLLILDEPTSGLDSTAAHRLVTTLGTLAQQKGKTVVASMHQPSSRVYQMFDKVLVLSEGQCLYFGKGSRAMSYFESVGFKPSFPMNPADFLLDLANGVCQVDNTSERDRPNIKQTLVHSYNTILAPRIKDAMQNMDTPTKETHHHPLEITSKERRYSNKNNRITLSDWFNQFTILLQRSLKERKHESFNRLRVFQVIAASLLAGLMWWHSDFRDVQDRLGLLFFISIFWGVFPSFNSVFAFPQDRAIFMKERASGMYTLSSYFMARIVGDLPMELLLPFIFLTLTYWMGGLRPDPWAFVLTVLVVLGYVLVSQGLGLFLGAAIMDSKQASTVAAVVMLAFVLIGGYYVHKVPSCMSWLKYMSSTFYCYRLLINIQYGDGKRISEFLGCSNGVLSDRGSCKFVEEDVVGQISPLGSIGALFIMFVGYRVLAYFALRKIKG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0425 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 667 - -
Dere01g0425 676 Pfam ABC transporter 96 247 IPR003439 GO:0005524
Dere01g0425 676 Gene3D - 85 314 IPR027417 -
Dere01g0425 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 320 IPR003439 GO:0005524
Dere01g0425 676 MobiDBLite consensus disorder prediction 1 45 - -
Dere01g0425 676 SMART AAA_5 105 297 IPR003593 GO:0016887
Dere01g0425 676 MobiDBLite consensus disorder prediction 8 33 - -
Dere01g0425 676 Pfam ABC-2 type transporter 408 613 IPR013525 GO:0016020|GO:0140359
Dere01g0425 676 CDD ABCG_EPDR 79 302 - -
Dere01g0425 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 312 IPR027417 -
Dere01g0425 676 FunFam ABC transporter G family member 22 84 314 - -
Dere01g0425 676 Pfam ABC-2 type transporter 277 382 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0425 Dere-ChrDere01 9371392 9378996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0425 64 334 Calmodulin-binding Proteins AT2G36910 26.909 2.01e-12 68.9