Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0406 ATGCATCTTGCGTGTTTTTCAATCCTGTTTGAAAAAATCTGGCCCTTCCTCCCTCCCCTTCCTTTCTCTTCACCGGGCACGCCTGGCCTGGTCTTCTCCTCCTTCGGATTTCGTTTTTGCTCATACTCCGGGGAGAGAAAGAAAGACATACCTAGATTTCCACTGATCTCAGATTTTCGTTCAAAAGGTGCTGGAAATTATCCCTCTTCATTTCTGTTTGTAAGTGACAAGGACATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAGGTTATCAGTCCCCATTCCAAGAAAGATCAGAAAAAACAGAAGTCGGATGAAGAAGGGTATGGTGAGCACAATGACTTGGAAGCAGCTTTACCAAATGAAAAAGCACAATTTGCTGTTCGTCCCGCTCTTCCACCTATAAAAGATATGAAATTGACTGAGGCAGATAACGAGCAGAGCCATTATGCTTATTCTGTGGCTCTTGCCACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCGGCAGCAGAGGTTGTCCGTCTCACTAGTGCTACTCTTTACCATGGAAAGTCAAAGGAAACAATAGCAGCTATTAAAATTCAGACAGCATTTCGAGGATATCTGGCAAGAAGAGCATTGCGTGCCTTGAAAGGGTTGGTGAGATTGAAGACAATGATACAAGGAAAATCTGTTAAACGGCAAGCAGCTTCTACCTTACGATGCATGCAGACCCTGACACGACTGCAATCTCAGGTCCTTGAGAGGAGGGCTAGATTGTCTGAGGAGCACCATGCTCTTCAGCGGCAGCTGCAGCTGAAACATGAAAAAGAAGTTGAGAAGCTGGAAGCTGCTACTGAAGAAGAATGGGATGATAGTGCGCAATCAAAGGAGCAAATTGAAGCAAAGCTGTCAAAAAGGCAAGAAGCTGCTATGAGAAGAGAGAAAGCTTTGGCCTATGCATTCTCCCATCAGCAAAAGTGGAAGAGCTCTTCAAGATCTGCAAATCCCACCACATTCATGGATCCTAACGATCCCCACTGGGGTTGGAGTTGGCTAGATCGCTGGGTAGTAGCCCAGCCATGTGACAGCCAAAGTGCTATGGATCACAAAAATGACCGTACATCCGTGAAGAGCACAATGAGCCAGCCCTTGTCAGTTGCAGAAATCACCAAACTATATTCTCTTCGCAATCATATTAATCACAATAACAAGCCTTCCCCATCTGGCCAAAAATCAAGTAGGCCTCCGAGTCACCATTCCCCTTCAACCCCAGCTTCAAGGGCACCATCTGTTTCATCTACTTCTGGAAGAGTAAGGGCACCAATCGCAAAGGGAACTTCTTGGGGTCGCGATGATGACTCGAGGAGCTGTCTTAGCATTCAGTCAGAAAGATACCGGAGGCATACTATTTCAGGATCATCACTGAGAGACGATGAGAGTCTTGCAAGCTCAGCTGCCTTCCCAGCTTACAAAGTACCCACAAAGTCTGCTAAGGCAAAGTCCAGAATGGAAAGTTCATCATCTAGTGCAGACAAAAAAGGGACGCCAGAAAAAGGACCTGTTGCATCTGCAAAGAAGCGGCTTTCCTTCCCGGATTATCCAGCTGGTACTTCAAGGAAGCATTCTGGTACTCTTAAGGTGGATACTGTAACTTCCAAGAAGGATACTGAAAAGAAAGTTAGCAATGGTTGGAGGTAA 1695 0.4637 MHLACFSILFEKIWPFLPPLPFSSPGTPGLVFSSFGFRFCSYSGERKKDIPRFPLISDFRSKGAGNYPSSFLFVSDKDMGRKGSWFSAVKKVISPHSKKDQKKQKSDEEGYGEHNDLEAALPNEKAQFAVRPALPPIKDMKLTEADNEQSHYAYSVALATAAAAEAAVAAAQAAAEVVRLTSATLYHGKSKETIAAIKIQTAFRGYLARRALRALKGLVRLKTMIQGKSVKRQAASTLRCMQTLTRLQSQVLERRARLSEEHHALQRQLQLKHEKEVEKLEAATEEEWDDSAQSKEQIEAKLSKRQEAAMRREKALAYAFSHQQKWKSSSRSANPTTFMDPNDPHWGWSWLDRWVVAQPCDSQSAMDHKNDRTSVKSTMSQPLSVAEITKLYSLRNHINHNNKPSPSGQKSSRPPSHHSPSTPASRAPSVSSTSGRVRAPIAKGTSWGRDDDSRSCLSIQSERYRRHTISGSSLRDDESLASSAAFPAYKVPTKSAKAKSRMESSSSSADKKGTPEKGPVASAKKRLSFPDYPAGTSRKHSGTLKVDTVTSKKDTEKKVSNGWR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0406 564 MobiDBLite consensus disorder prediction 498 512 - -
Dere01g0406 564 MobiDBLite consensus disorder prediction 397 439 - -
Dere01g0406 564 MobiDBLite consensus disorder prediction 397 454 - -
Dere01g0406 564 PANTHER IQ-DOMAIN 5-RELATED 79 531 - -
Dere01g0406 564 Coils Coil 255 286 - -
Dere01g0406 564 MobiDBLite consensus disorder prediction 362 381 - -
Dere01g0406 564 MobiDBLite consensus disorder prediction 545 564 - -
Dere01g0406 564 ProSiteProfiles IQ motif profile. 192 220 IPR000048 GO:0005515
Dere01g0406 564 SMART iq_5 191 213 IPR000048 GO:0005515
Dere01g0406 564 MobiDBLite consensus disorder prediction 470 564 - -
Dere01g0406 564 Pfam IQ calmodulin-binding motif 195 213 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0406 Dere-ChrDere01 9114334 9118700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0406 79 534 IQD Protein Family AT5G03040 42.888 7.79e-111 337