Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0396 ATGCCGCCTGAACCGTTGCCTTGGGACCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTAGGGTCTGTGGCGAGATGGAGGGACTCTTCTCATCACGGCTCCCGAGAGTTCAGTCGGTGGGGATCGGCCGATCCCCGAAGACCGCCAGGTCATGGTAAGCAGGGCGGTTGGCACCTGTTTTCCGAAGAATCTGGTCATGGGTATGCCCTTTCTCGGTCCGGTGATAAGATGCTGGAAGAAGAGAACTGTCGGACATCTGTTTCACGGGGGGATGGAAAATACGGCAGGAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGACCACCAACGGCTCTCTAAATTTGTCCAGGAGGCCACCAGATGTGACTAATGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACATGGGATCAGTATCATCTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGGGTTGGGTACAGGCCAGAGATGCGACAGAGAGCATTCTCTGGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGCATTGGAGGCGCAGATTCCAATGAAGCGAAGTCTGAGTTGCATCCAAAAAATGCAACTCCTATTGAATCCCATTCAGGGGATGGTGCTGCATGTGTGACATCTTCGGCACCTTCTGAAGAGACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAGGAGCCTGATGTAAGTGCAAGCAAGGATGGCCCTGTCTTGTCAACTAGTAATACGGATCCCTGTAATTTTCTTGGTTCAAATTTACTAGATAAAAGTCCAAAGGTTACAGGATTTTCAGATTGTGCATCACCTGCAACTCCATCTTCTGTTGCCTGCAGTTCTTCACCAGGTGTGGATGATAAATTGTATGAAAAAGCTGTGAATATTGACAGTCATGTCAGTAATTTGAGTGGCTCAATGGATCCTGTGCCTCAGAATCATCTACAGGCTTTCCCTTTTAATTTAGAGAAGTTGGATATTGACTCCTTGACTGCTTTGGGTTCTTCACTTACTGGGTTGCTGCAGTCTGATGACCTGAGTTCTGTGGATCCTGCCACAGCAAGTTCCACTGCAATGAATAAGTTGCTGATATGGAAAGCTGATCTTTCAAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTTGAAAGTGAACTGAAGTTGCTGAAAACTGAATCTGGAAACAGCTATCCTTCTCCTGCAGCATTGGACTCCTTGCTGGCGGGAAACAATACAAAATCTTGTGAAGGAAATGTTGGAGGTAATGACAGAGTCTCTCGGCCAGAGCCATTGAAAATTTGTTCTTCTGCTGATCTTGATGTGGAGAAGATGTCTCCTTCAACTAACTTGCATAGTCTTCATGAAAATGGCAAGGAAGAAGATATTGATAGTCCTGGAACTGCAACCTCTAAATTTGTGGAGCCTCAACCTCTTATTAAAGCAGTTTCTTCATGTGATATGAGGAGAAATGATAATTGCTCTGGAGACTTGGATGCCGTTCAAGCTGTAAGCATGAGATTCTTAGTGCCCTGTTCTACAAGTGAGCAAGCTAGTGTGTCTGCTTGTGGTGGTGGTAGTGCATCTATGGATGTAAAAGATGGCATGGGTGCTGCCCTTGGTGCAGGCGTTTGTTCTAGATCTAAGGGTATATTGTATAATACAATTATTTCTTCCAATAAAGAATCTGCAAACAGAGTGTATGAAGAATTTGCCAAGTTACTGCCAAAAAATTGTTGTAAGATTGGTAATATAGGAGCTACCAGTGACTCATGCTCTTCATATGGTGCATTTATTAGAGAAAAATTTGCAGAGAGAAAGCGGTTTGCAAGATTGAAGGAGCGAGTTATAACCCTTAAGTTTAAAGCCTTGCATCACCAGTGGAAAGAAGATATGCAATTGCTATCTGTAAGGAAATGTCGACCGAAGTCTCATAAGAAACATGAACTAGGTGTGCGAACTACTAATAGTGGTTATCAGAAGAATCGTTTCTCCATTCGTTCTCGTATTTCCTACCCTGGAAATAATCTAAGCCTGGTTCCAACATCTAAGATGATTAATTTGGCAAGCAAACTGCTTTCGGACCCCCAAGTTGAATCTCACAGGAGCACCTTGAAGATGCCTGCTTTAATTTTGGATGAGAAGGAGAAGATGATATCAAGGTTTGCATCTTGTAATGGGCTGGTTAAGGATCCTTTGGCATATGAGAAAGAGAGGGCTATGATCAACCCTTGGACGTCAGAAGAGAAGAATATTTTCATGGAGAAATATGCTGCCTTTGGAAAAGACTTCCGAAAAATTGCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAATTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATTAAGCAAGATGTTAGGAAGCTAGGGAAGTCATATTTGACCAACACTGACTTGATAGCATCAGGGAAAAAATGGAATTGTGAAATAAATGCTGCTTCACTTGATATTTTGAGTGCAGCTTCAGTGATGGCAGGCCACACAGACAGAATTAATGGTAATAAAAAATTGTGTTCAGCAAGTTTTCTTCTAGGGGGTTATGGTAATATGAAAACATCAAAGGGTGAGGATAGCATCCTAGAGAGATCGAACAGTTTTGACACTCTTGGGGATGAGCGAGAGGCAGTTGCTGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGTATAACAAGTTCAGTTGATCCTGTAGAGGCTAACAAGGACAGGAGGTGTCTGAAAGCGAACCCTGTGAGAAAGCAATTGTTGACGCCTGTTGTTACTCAGAGTGTTGAGGATGAGACTTGTTCAGATGAGAGCTGTGAGGAGATGGATCCAACTGATTGGACTGATGAGGAGAGGTCTGCCTTTCTTCAGGCTGTATCATCTTTTGGTAAGGACTTTGCTAAGATCTCACGGTGCGTAGGTTCAAAGTCCGAAGAGCAGTGCAAAGTGTTTTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGCGCCCCAAATCTGTAAGTGGAGGATACCCAGTGAATGATGATGCAAATGGTGGTGGGAGTGATACAGATGATGCATGTGTCGTAGAGACAGGTTCAGCAATTGGCACTGATAGATCCGGCACTAAAACAGATGAGGATCAGCCGTTGTCGATAATGAATGCATACTCTGATGAATTCAATCCTGTTGAAGCCAAAAACTTGTCAACTGACTTGAACAAATCAGATAATATTATTCATCAAGATGCCAAAGATGTGGATAATATGGTATCTGATGCTTGTGAAATGAAGGGCAAGTCTATACTTGGCTCTGATGGTGGTGGGGATGTTTTGTACTGTTCTGACAAGTCTGTTTCAGCCAGTGGCCAGATGAATATGTTAGATAGCATAGAATCGGGAAAAGATGAAGCAAAGAAATTGGTAGGTGCAGTGACAGAGTCGGTACCATGCCAATCTAATTCTGTTTTTGAGGTTTCTTCTGAGGCTCCTGAACCTCTTGAAAAGGAGTTAAAAGAGCAGAAACTGTCATTGCCTGAATGTCTTGATGACAGAGATAATAAACGTGAAGCTGTTGTTGATGGTATAGTTGAATCAAATAGCTCAGCACAAGATTCAAGTAGATTCGTAAATGCTTCGACCTTGTCTGTGGGCAATTCTTGTACGGGGTTTAACCTTAAAGCTGAAAGTCAGCGCCAATTGTCCCATGGAGAGCCCTGTATAGCAGTGTTGCCGCTGGAGAATTCTCAGTCAACTGCAAATTTGTTGTTGCAAGATACTATCACTGTTCAAGGTGAGAAAACAGCAAGTCAAGATCGACTGCCTTCTGCATGTGAATTTCAGGGAAGTAGAGATATACAATGTCATAATTCCACAAGCAATGATGGGCAACAGATTCATATTTCCAGGCATGCATTGGACCATGTTGAGAGTACTAGCATCCTTCAGGGCTTTCCCTTGCCCGTTAAAAAAGAAGGGAATGGTGATAAGAGTTGCAGCAATTCAGCAACTGAGTTGCCTCTGCTGTCCCAAAAGATTGATGAACAAGCTGGTGGTCGTTGCAAAACACAATTGCGGAATTCATTAGATTCAGAAGTAACATCCAGAAATGGTGATGTGAAATTGTTTGGGAAGATATTAACCAATCCTTTATCCACTCAGAAATCTAATTTGAGTTCCAAGGGACGTGAAGAAAATGGTACCCGACATCCAAAGTTAAGCAGCAAGTCATCTACCCTGAAATTTAGTGGTCAACAGAATGCTGATGGAAATTCAACAATTTTGAAGTTTGATCGGAGTGATTATAATATAGGCCTTGAAAATGTTCCCATGAGGAATTATGGTTATGGGGATGGTAATAAAATGCAGACTGGCATTCAATCAGTACCTGATTCTGCCATCTTGCTTGCAAGATATCCTGCTGCCTTCAGTAATTATCCTACATCCTCAGCCAAGTTGGAGCAACAGTCATTGCAGGCGTTTACCAAGAGTAATGAACAGCTCTTGAATGGCCCATCCGCATATACAACTAGGGAAATCAGTGGCAGTAATGGCATAATTGATTATCAGATGTTTAGAAGTAGGGATGTTCCTAAAGTGCAGCCATTTATGGTAGACGTGAAACACCGCCAAGATGTATTTTCTGAGGTGCCGAGAAGAAATGGTTTTGAAGCAATCTCAAATCTACAGCAGCAGGGGAGGGGAATGGTTGGATTGAATGGTGTTGGTAGGCCAGGGATTCTGGTGGGAGGATCACACAGTGGTGTCTCTGATTTTGTGGCAGCCATCAAAATGCATTATTCCAACTCTGATCAGTATGGTGGGAATGGGAGTATCATGAGAGAAGAGGACTCTTGGGGAGGGAATAAGGGAGACTTAAGCAGGTAG 5094 0.4301 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADPRRPPGHGKQGGWHLFSEESGHGYALSRSGDKMLEEENCRTSVSRGDGKYGRNSRENRGSFSQRDWRGHSWETTNGSLNLSRRPPDVTNDQRSADDMLTYPSHPHSDFVNTWDQYHLKDQHDKMGGVNGLGTGQRCDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSIGGADSNEAKSELHPKNATPIESHSGDGAACVTSSAPSEETISRKKPRLNWGEGLAKYEKKKIEEPDVSASKDGPVLSTSNTDPCNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVDDKLYEKAVNIDSHVSNLSGSMDPVPQNHLQAFPFNLEKLDIDSLTALGSSLTGLLQSDDLSSVDPATASSTAMNKLLIWKADLSKVLEVTEAEIDLLESELKLLKTESGNSYPSPAALDSLLAGNNTKSCEGNVGGNDRVSRPEPLKICSSADLDVEKMSPSTNLHSLHENGKEEDIDSPGTATSKFVEPQPLIKAVSSCDMRRNDNCSGDLDAVQAVSMRFLVPCSTSEQASVSACGGGSASMDVKDGMGAALGAGVCSRSKGILYNTIISSNKESANRVYEEFAKLLPKNCCKIGNIGATSDSCSSYGAFIREKFAERKRFARLKERVITLKFKALHHQWKEDMQLLSVRKCRPKSHKKHELGVRTTNSGYQKNRFSIRSRISYPGNNLSLVPTSKMINLASKLLSDPQVESHRSTLKMPALILDEKEKMISRFASCNGLVKDPLAYEKERAMINPWTSEEKNIFMEKYAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYLTNTDLIASGKKWNCEINAASLDILSAASVMAGHTDRINGNKKLCSASFLLGGYGNMKTSKGEDSILERSNSFDTLGDEREAVAADVLAGICGSLSSEAMSSCITSSVDPVEANKDRRCLKANPVRKQLLTPVVTQSVEDETCSDESCEEMDPTDWTDEERSAFLQAVSSFGKDFAKISRCVGSKSEEQCKVFFSKARKCLGLDLMRPKSVSGGYPVNDDANGGGSDTDDACVVETGSAIGTDRSGTKTDEDQPLSIMNAYSDEFNPVEAKNLSTDLNKSDNIIHQDAKDVDNMVSDACEMKGKSILGSDGGGDVLYCSDKSVSASGQMNMLDSIESGKDEAKKLVGAVTESVPCQSNSVFEVSSEAPEPLEKELKEQKLSLPECLDDRDNKREAVVDGIVESNSSAQDSSRFVNASTLSVGNSCTGFNLKAESQRQLSHGEPCIAVLPLENSQSTANLLLQDTITVQGEKTASQDRLPSACEFQGSRDIQCHNSTSNDGQQIHISRHALDHVESTSILQGFPLPVKKEGNGDKSCSNSATELPLLSQKIDEQAGGRCKTQLRNSLDSEVTSRNGDVKLFGKILTNPLSTQKSNLSSKGREENGTRHPKLSSKSSTLKFSGQQNADGNSTILKFDRSDYNIGLENVPMRNYGYGDGNKMQTGIQSVPDSAILLARYPAAFSNYPTSSAKLEQQSLQAFTKSNEQLLNGPSAYTTREISGSNGIIDYQMFRSRDVPKVQPFMVDVKHRQDVFSEVPRRNGFEAISNLQQQGRGMVGLNGVGRPGILVGGSHSGVSDFVAAIKMHYSNSDQYGGNGSIMREEDSWGGNKGDLSR 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0396 1697 MobiDBLite consensus disorder prediction 1455 1490 - -
Dere01g0396 1697 ProSiteProfiles SANT domain profile. 799 850 IPR017884 -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 33 47 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 507 530 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 1675 1697 - -
Dere01g0396 1697 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1693 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 201 269 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 115 145 - -
Dere01g0396 1697 Coils Coil 425 452 - -
Dere01g0396 1697 SMART sant 1017 1065 IPR001005 -
Dere01g0396 1697 SMART sant 800 848 IPR001005 -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 1474 1490 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 78 114 - -
Dere01g0396 1697 ProSiteProfiles SANT domain profile. 1019 1067 IPR017884 -
Dere01g0396 1697 Gene3D - 780 852 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 1 154 - -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 202 227 - -
Dere01g0396 1697 Gene3D - 962 1073 - -
Dere01g0396 1697 CDD SANT 1021 1059 IPR001005 -
Dere01g0396 1697 Pfam Myb-like DNA-binding domain 1020 1060 IPR001005 -
Dere01g0396 1697 SUPERFAMILY Homeodomain-like 787 848 IPR009057 -
Dere01g0396 1697 MobiDBLite consensus disorder prediction 8 27 - -
Dere01g0396 1697 SUPERFAMILY Homeodomain-like 1018 1067 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere01g0396 Myb_DNA-binding 2.1e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0396 01 8966427 8974372 Dere01g0396 01 8966427 8974372 ECH