Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0390 ATGAAGACTCCAGAAAAGGAGGAATATGAGAGAACGTTGGAGGAAACGCCAACGTGGTCTGTGGCTGTTGTGTGCTTCGTGTTGCTTGCTCTTTCCATCTTAATCGAACACATCATTCACGCTCTTGGAAAATGGCTCCATAAGAAGCACAAGCATGCTCTTTACGAAGCTCTTGAAAAAGTGAAAGCAGCTGATGCTGATGGGATTCCTCTCGTTTCTGCTGACGGTGCTGCAAGGTCCCATTGCAAATATTTGTATCTCAATGGATGTCGCGGTGAAGTTGCATTTGTGTCTGCATATGCGATTCACCAGCTTCACGTATTCATATTTTGGCTGGCAATATTTCATATTCTACAGTGCATTTTAACATTGGCTTTGGGCAAGACCAAGATGAGAAGATGGAAAACGTGGGAAGATGAGACCAAGACAGCTGAGTATCAGTTCTATAATGGTATACAAGGGACACAACATTTGGACGAAGGCATTTGGACATATGGAGTCGATCATCAATTTCCCTATGGATTGTCCCACTTCATATATGTTCTTGCTTCTTCATTTTTCTATTCCATTACGTTGAAGCTTTCCAATTCTTCATGTTCTGATTGTCACTATCTTCTGTTCTATGTATTCTGCAGAATGCATTCCAACTCGCGTTCTTCACTTACACTACGCTATGTGACCTTGCCTCTTTATGCCCTAGTTACACAGCACCAAGGCAAGCGGAGTGACAGTGCCCCAACTTCTCCAAGGGCATCGATCCACAGAAGTGACCGTTGGGACGTCGAAGAAGGGACACCCTACCTTATGATTGACCCTACAATGGAAGGACATGAGATCCAAACGATGCAGCATCGGAGTCTCCCAGAGTCTCTCAGATCAGACATCATAGAACTGATCAACACTTCAGAAATAATGGCCCTAGAATATGAGAGAACCTTGGAGGAAACATCAACGTGGGCCGTTGCTGTTGTGTGCTTTGTATTGCTCGCTATTTCCATCTTCATCGAACATATCATTCACGCCATCGGAAAATGGTTGAACAGGAAGCAGAAGCATGCTCTTTACGAAGCACTTGAAAAAGTGAAAGGAGAGCTTATGGTGATGGGATTCATATCGTTTCTGCTTACGTTGTTTCAAAGTTCGATTTCGAATATATGCATATCAAGAGAAGTTGCATCCTCGTGGCGTCCCTGTGCGTATTACGAGAAGAAGGTAGAGGCAGCAAAAGAGGATTATGGTTCTGGAGATACCAATTCTCGGAAGCTTCTCCAAGTTTCGGATCCTACGCCTCGCCGTTTCCTGGCTACAAAAGGATATGATCAATGCGGAGAGAATAAAGTTGCGTTTGTGTCAGCATATGGGATTCACCAGCTTCACATATTCATATTTGTGCTGGCAATATTTCATATCCTACAATGCATCATAACGCTGGCCCTGGGCAGGACCAAGATGAAAAAATGGAAGAAGTGGGAAGATGAAACAAAGACAGATGAATATCAATTCTCTAATGATACAGAGAGGTTCAGGTTTACGAGGGACACAACATTTGGACGAAGGCATTTGAACATATGGAGTCGATCATCAATTTCCCTATGGATTGCAAGCTTCTTCAGGCAATTTTTTGGATCAGTTACGAAGGTTGACTATATGGCACTTAGGCGAGGATTTATCATGGCCCATTTGGCTCCAGGAAGCGAAGCAAGATTTAATTTTCAGAAGTATATACAGAGATCACTTGAAGAGGATTTTATGGTTGTAGTGGGAATAAGCCCAATCATATGGTTATTTGCGGTCTTGTTCTTGTTGACAAATACTCATGGATGGTATCCATATTTGTGGCTTCCATTTATCCCGCTGATTATAATCTTACTGGTGGGTGCTAAGCTACAAATGATAATCACAAAGATGGGGTTGAAGATTCAAGAAAGAGGGCAAGTTGTGAAGGGTGCACCAGTGGTTGAGCCCGGCGATCATCTCTTCTGGTTCAATCGTCCTCGTTTTCTTCTCGATTTGATTCATTTTGTTCTCTTTCAGAATGCATTTCAGCTTGCATTTCTTGCATGGTCTCTTTCTACATTCTCCATAAAGTCCTGCTTTCATAGAGGAACTGCAGATATTGTGATTAGACTTACAATGGGAATTCTCATACAAGTTCTGTGCAGCTATGTGACTTTGCCTCTTTATGCTCTGGTTACACAGATGGGATCAACCATGAAGCCCACAATCTTCAACGAGCGAGTAGCGAAGGCGCTGAAGAAGTGGCACCACACAGCCAAAAAACACGTTAAACAGAGCAGGCACTCAGAGGCAAACACGCCCTTATCGAGTGCCCCAACAACCCCAACCCATGGGACTATGTCCCCTGTTCATCTCCTGCACAAGCACAAAGGAGGGCGAAGTGACAGTGCCCCAACTTCTCCAAAAAATAATAGCCCTGTGGACGTTGAAGAAGGGACACCCTACCCTACAATGGAAGGGCATGAGATCCATATGATGCGAGTTTGGAGGTCTGGTTCCATAGAATTACCCCCTGGGCCTCGTCCTATAAGAACCCATCATGACATTGGCCCAGTCACCACTCACCACCAGTCAGGGCGACTCCGAAATCTGAAACCAATTCCCACCTTTCTAGTTTCAGAAGTCTCTCTCCCTCTCTCGCTCTCTGTCTTGGGGAAGATTGAATCTTGGCCGTTCGTTCATCATTCGCCATCTTCTTGGACCTCCGTCTTGATCTTGATCGCTACCATGGAGGTTCGGTCCAACCCTACCCCCGACTACTCGTCGGCCCCGCAGCAGCATCGTCACCATCACGCCCCTGCGCTTCCATCCAAACAGCCATCTGCTTCTCCTCACCCTGTAGACACCACTTCTGTTTCCCAGAGACTTCAGAAGGAGTTGATGTCTCTCATGATGAGTGGGGGAGATCTTGGAGTATCGGCTTTTCCTGATGGTGAGAGCATTTTTACATGGATTGGCACAATTGAAGGCGGAAAAGGAACCATATACGAGGGTTTATCTTATAAACTCTCTTTACGTTTTCCCCTGGACTATCCTTTTAAGCCTCCCCAAGTTAAGTTCGAGACTATGTGCTTTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTTGACATCCTCCAGGACAAATGGTCTTCAGCTTATGATTGCAGAACTATTCTTTTGTCAATTCAAAGTTTATTGGGAGAGCCTAACCCGGAAAGTCCTTTAAACAGCTATGCTGCAGCGCTCTGGAACAATAAGGAAGATTACAGGAGAATGGTGCATAAACAATATTTTGCAGGAGAAGCACTTGAAAGCTGA 3321 0.4469 MKTPEKEEYERTLEETPTWSVAVVCFVLLALSILIEHIIHALGKWLHKKHKHALYEALEKVKAADADGIPLVSADGAARSHCKYLYLNGCRGEVAFVSAYAIHQLHVFIFWLAIFHILQCILTLALGKTKMRRWKTWEDETKTAEYQFYNGIQGTQHLDEGIWTYGVDHQFPYGLSHFIYVLASSFFYSITLKLSNSSCSDCHYLLFYVFCRMHSNSRSSLTLRYVTLPLYALVTQHQGKRSDSAPTSPRASIHRSDRWDVEEGTPYLMIDPTMEGHEIQTMQHRSLPESLRSDIIELINTSEIMALEYERTLEETSTWAVAVVCFVLLAISIFIEHIIHAIGKWLNRKQKHALYEALEKVKGELMVMGFISFLLTLFQSSISNICISREVASSWRPCAYYEKKVEAAKEDYGSGDTNSRKLLQVSDPTPRRFLATKGYDQCGENKVAFVSAYGIHQLHIFIFVLAIFHILQCIITLALGRTKMKKWKKWEDETKTDEYQFSNDTERFRFTRDTTFGRRHLNIWSRSSISLWIASFFRQFFGSVTKVDYMALRRGFIMAHLAPGSEARFNFQKYIQRSLEEDFMVVVGISPIIWLFAVLFLLTNTHGWYPYLWLPFIPLIIILLVGAKLQMIITKMGLKIQERGQVVKGAPVVEPGDHLFWFNRPRFLLDLIHFVLFQNAFQLAFLAWSLSTFSIKSCFHRGTADIVIRLTMGILIQVLCSYVTLPLYALVTQMGSTMKPTIFNERVAKALKKWHHTAKKHVKQSRHSEANTPLSSAPTTPTHGTMSPVHLLHKHKGGRSDSAPTSPKNNSPVDVEEGTPYPTMEGHEIHMMRVWRSGSIELPPGPRPIRTHHDIGPVTTHHQSGRLRNLKPIPTFLVSEVSLPLSLSVLGKIESWPFVHHSPSSWTSVLILIATMEVRSNPTPDYSSAPQQHRHHHAPALPSKQPSASPHPVDTTSVSQRLQKELMSLMMSGGDLGVSAFPDGESIFTWIGTIEGGKGTIYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQFGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALWNNKEDYRRMVHKQYFAGEALES 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0390 1106 MobiDBLite consensus disorder prediction 768 786 - -
Dere01g0390 1106 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 957 1103 IPR000608 -
Dere01g0390 1106 PANTHER MLO-LIKE PROTEIN 1 76 149 IPR004326 GO:0006952|GO:0016020
Dere01g0390 1106 Gene3D Ubiquitin Conjugating Enzyme 952 1100 IPR016135 -
Dere01g0390 1106 MobiDBLite consensus disorder prediction 758 821 - -
Dere01g0390 1106 SUPERFAMILY UBC-like 954 1098 IPR016135 -
Dere01g0390 1106 CDD UBCc 959 1098 IPR000608 -
Dere01g0390 1106 Pfam Ubiquitin-conjugating enzyme 961 1096 IPR000608 -
Dere01g0390 1106 MobiDBLite consensus disorder prediction 922 957 - -
Dere01g0390 1106 SMART ubc_7 960 1103 - -
Dere01g0390 1106 Pfam Mlo family 89 153 IPR004326 GO:0006952|GO:0016020
Dere01g0390 1106 Pfam Mlo family 310 795 IPR004326 GO:0006952|GO:0016020
Dere01g0390 1106 Pfam Mlo family 10 63 IPR004326 GO:0006952|GO:0016020
Dere01g0390 1106 FunFam ubiquitin-conjugating enzyme E2 20 951 1100 - -
Dere01g0390 1106 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 1031 1046 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0390 Dere-ChrDere01 8890087 8921661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0390 305 812 MLO family AT2G39200 67.836 0.0 713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0390 01 8890087 8921661 Dere01g0390 01 8890087 8921661 ECH