Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0384 ATGGCTTCCAACACGTTGATGAGCTATGGCATTGCCACTGCCTCTGCCTTCCCTTCTGTGCTTTCTTCCTCTAAATCCAAATTCGCCGCCGCAGTCCCACTTCCCGGCAGTGGCTCGGCCGCCTCCTCTCGTTTCTCCATGACCGCCGACTGGATGCCCGGCCAGCCCCGACCACCGTACCTCGATGGTTCAGCACCTGGTGACTTCGGATTCGACCCTCTTCGTCTAGGGGAAGTGCCAGAGAATCTTGAGAGATACAAAGAGTCAGAGCTCATTCACTGCAGATGGGCTATGCTTGCTGTGCCAGGGATATTGGTACCAGAGGCATTGGGGTTAGGGAACTGGGTGCAAGCACAGGAGTGGGCAGCAGTTCCGGGGGGTAGAGCGACCTACCTGGGGAACCCAGTGCCTTGGGGTACCCTACCCACCATTTTGGTCATAGAATTTCTAGCCATAGCCTTTGTGGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTTGACCCTCTTGGCTACTCCAAGGACCCCGCCAAGTTCCAAGAGTACAAAGTCAAAGAAATTAAAAATGGGCGTCTTGCTCTATTGGCATTTGTGGGGATATGTGTTCAACAGTCAGCATACCCAGGAACAGGACCATTGGAGAACTTGGCCACTCACTTGGCTGATCCATGGCACAACAACATTGGGGATATCATCATCCCCACATCTGTTTCGCCCTGA 744 0.5363 MASNTLMSYGIATASAFPSVLSSSKSKFAAAVPLPGSGSAASSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGRATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFQEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPTSVSP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0384 247 Gene3D Chlorophyll a/b binding protein domain 52 238 - -
Dere01g0384 247 FunFam Chlorophyll a-b binding protein, chloroplastic 52 238 - -
Dere01g0384 247 SUPERFAMILY Chlorophyll a-b binding protein 41 241 - -
Dere01g0384 247 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 239 IPR001344 GO:0009765|GO:0016020
Dere01g0384 247 Pfam Chlorophyll A-B binding protein 58 212 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0384 Dere-ChrDere01 8820167 8822372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0384 1 199 Chloroplast and Mitochondria Gene Families AT3G54890 82.000 1.42e-109 313