Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0374 ATGGCTAAGGAAGTTGAGGTTGCAGAGCGTGGGTCTTACTCCGCCAAGGACTACCATGACCCACCTCCGACTCCGCTCATTGACGCCGAGGAGCTCACCAAGTGGTCCTTTTACAGGGCTTTGATTGCTGAGTTCATAGCCACCTTGCTTTTCCTTTACATTACCGTTCTCACTGTGATTGGCTACAAGAGCCAGATTGATGGTGGCGATGGTTGTGGTGGGGTTGGCATTCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCATCCTTGTTTACTGCACCGCTGGAATCTCAGGAGGTCACATTAACCCAGCAGTGACGTTTGGGCTCTTCTTGGCTCGCAAGGTGTCACTGATTAGAGCCATCTTGTACATGGTGGCTCAGAGCTTGGGGGCTATCTGTGGAGTTGGCTTAGTGAAGGCCTTCCAAAAGGCTTACTACAAAAAGTACGGTGGTGGGGCCAATGAGCTCGCTGATGGCTACAGCATCGGCACTGGCTTAGGCGCTGAGATCATCGGAACCTTTGTCTTGGTATACACTGTGTTCTCTGCCACTGATCCCAAGAGAAACGCAAGAGATTCCCATGTGCCAGTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCATGGTTCACTTGGCCACCATTCCGGTCACCGGTACCGGCATTAACCCGGCTAGGAGTCTTGGAGCTGCTGTTATCTACAACCAACAGAAAGCCTGGGATCACCACTGGATCTTCTGGGTGGGACCATTCATTGGGGCGGCCATTGCGGCATTCTACCACCAGTTCATCTTAAGGGCAGGTGCAGCTAAGGCTCTTGGATCATTCAGGAGCAACCCCTCTGTTTGA 855 0.5263 MAKEVEVAERGSYSAKDYHDPPPTPLIDAEELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQIDGGDGCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAILYMVAQSLGAICGVGLVKAFQKAYYKKYGGGANELADGYSIGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQQKAWDHHWIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPSV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0374 284 Pfam Major intrinsic protein 31 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 SUPERFAMILY Aquaporin-like 31 268 IPR023271 -
Dere01g0374 284 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Dere01g0374 284 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PRINTS Major intrinsic protein family signature 170 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 278 IPR034294 -
Dere01g0374 284 Gene3D Glycerol uptake facilitator protein. 24 284 IPR023271 -
Dere01g0374 284 FunFam Probable aquaporin PIP1-2 24 282 - -
Dere01g0374 284 CDD MIP 39 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere01g0374 284 NCBIfam MIP family channel protein 43 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0374 Dere-ChrDere01 8604717 8607757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0374 1 284 Major Intrinsic Protein MIP AT3G54820 82.230 5.94e-175 483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0374 01 8604717 8607757 Dere01g0374 01 8604717 8607757 ECH