Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0351 ATGTCACCTGTCATCTTCTTCCTGGTGCTGCAACTTTTAGCATCAAGATGCTCAAATGGTTCTGTTAGTGCAAGCGAAGGAAGAAGAAAGTGCTCGGTCACGAGCATAGGCGCAGTGCTTGATTTGGGATCGCGCATGGGAAAAGAGCAGAAGATAGCCATGGAAATTGCAGTCCAAGACTTCAATCGCTTAGGATGTTCGAAGCTGCTTCTGAATTTCCATGATTCTCTCGGGATTTCGGCTCGGGCTGTTGCATTCGTTATGGATCTTGTACACAGCAAGCAAGTGCAAGCTATCATAGGAACGGTAACACACAATGAAGCAACTCTGGCTACTGAAATTAACAACACCACGAAGAACGTCCCTATCTTGTCTCTCATTTCACCTGCAGTAAGCACAGAGTCACCTTCAATTCCATTGCCCTACTTTATTCAAGTGGGCACCGATATCGCCATTCACATTCGATGCATTGCCGCCATTGTTGGGGAATTCAGGAGGCGAAAGATAACGGCAATCTATGAACAGAATGATGGGTTTTCCTCTGATCATGGGATTCGGACTCTCCTCTCCTACTCCCTTGGACTTGCTGGTTCCGAGATTGATGATTATTTAGCTTTGCCTTCCTTCTCTTCTCTATCAAATCCTGAAGTTACTATTGAAAAGGAGCTTAGCAGGCTCAAGAGCGGGAGTAACAGGGTGTTCTTGATTGTGAAATCTCCTTTAGAGATGGCGAGTTTGCTTTTTAAGAAGGCGAAACAAATGGGAATGATGGAAAGAGGATCGTTGTGGGTTATGCCCGATGAGGTTGCTAGCCTCATTGATTCACTTGATTCCTCTGTTATCTTTAACATGCCAGGTGTTATTGGATTTAAAACCCACTTCCTAGAAAAGAGCGAGACATTCAGACAATTTAAATTTGAATTTCGAAGGAAATTTGCATTAGAGTATCCAGAAGATGAGAACGTCAACCCCAGTATCTTTGCGCTTCGATCATATGATGCGACTTGGGTTATTGCTCAGGCCACCAAGAAATCACGAGGACAGTTCTCCCAGGAAGAATTTTCTGAAAGGATTCTAGCCAGTCATTTTGAGGGACTAAGTGGTAAGATTAGCCATAAAAATGGAAAAATATTGCAATCACAGACCTTCAGTCTAATCAGTGTGATTGGGAGAAGCTACACAGATTTAGTATTTTGGTCTCCAGAATTTGGTTTCTCTAAGAACCTTGTCAGACATCAGCTGCTGGAGATAGCCACAAACAATGGTTCTACTGTAGTTTATGCGCCAGGAGCCTACAGTAATGAGGAAAAAACATTGAAAATAGGGGTGCCTGCAAAAGGTACCTTCACCCAGTTTGTGAGTGTGACTTATGACCATAGTCGAAATGAAACTTCCATCACAGGTTTCTCAGTTGATGTTTTTAAAGCTGCTGTTAAACGTCTGCCATATCACTTGCCATATGTGTTTGTTCCCTTCAATGGTTCTTATGATGAAATGGTTGAGCAAGTCTACAAGAAGAAAATAGATGCTGCTGTTGGAGATATAGATATAATGGCATATAGATATCAGTACGTGATATTTTCTCAACCATATGTTGACTCCGGCCTTTACATGGTGGTACCTGTAAAACCCAATAAATCAAAGGAAACATGGTTGTTCGCGCGTACCTTTACAAAAGAGATGTGGCTTATGATGGCAGCAATGCACAGTTTCATTGGAATTTTCATTTGGCTAATGGAACGGCAAGTGAATGAAGAACTGAGGGGGCTTGGAGCTATGTTTTGGTTTTTAATCACTGTACTCTTCTATGTACACAGAGAACCAATAAGACATCCCTTGACTCGGATTGTGTTGGGACCGTGGTTATTTGTTATCCTTGTGGTAACAACAAGTTTTACAGCAAGTTTGACATCCAGGATAACTATGAAACAACTTGAACCATCTGTGTTAAATATCAAAACCCTTCTGAGGACAAATGCCCCTGTAGGGTGCAATGCAAATTCATTTATCGCAAAATATTTGATGGAGGTACTTGAGTTTCAGCCTAAGAACATTAGGAGAATCAACTCTATTAGTGCTTACCTTACAGCCTTTGAGAACAGGGATATTGAAGCAGCTTTCTTTGTTGCTCCACATGCTAAAGTCTTCCTTGCTAAGTACTCATGCGAAGGCTACATCAAAGCAGGGGACACTTTGAAGCTTGGTGGATTTGGCTTTGTTTTCCCAAAGGGTTCCCATCTGGTTGATGACATATCAGAGGCAGTACTGCATGTGACAGAGAGTGGAGTGATACAAGAGTTAGAAAAAGAGATGATATCAACTGTTAGTTGCTCCTCTTCAGAAAGCAAGACCCAAGAAGATGGATCGTTAGGTGTTCAGCCCTTCCTTGGGTTATTTTGCATTTCTGCAACTATTGCTGTCCTCGCATGGTTATATTCCATCAAAGTTCTGGTGGTACGTACGTTGCGAATCTTAATGAGACACGTACAAGAAACCTTTGCCCAATTCAGGATAATATGGCGTTGGATAGAAGCGTCGATGCTAATGAGTACATCTGGGTTTGCCAAGAGACCAAACCAATTCCATTCCTTTTTCTCTGATGAGCCGCCTCTTCCCCCTGCGCACATTAGCCCCAACCCCAACCTCGATCTCGACCTCTCGATGTGCAAGTCCAAAAACAGCGCAAACGTGATAGAACCCAGGCCCCGTCGAACCCGCACCTTTCAATCTTCGTCTTCTTCGCGTCGCACCACCGCCAATAATCTCCCTCCCAGTTCTTCTTCCTTCATGCTCACAACAGACTCCACTAGCTACTACAACAAGGACTGGTCTAAGGCCTCCTCCCTTTCAAGCGGAGCTTCCCTCTCTAGCCTCAAAGAGTCTTTGCCCGAGAATCCTCATATCTACGAGTTCTCCGAGATTTCCTCCGCCACCGGAAATTTAAAATCTGATAAATTGTCCTCCTCTTCTTCTTCTTCGTCTTGGTTATGCTCCATTCGCAACAAGGAGGTTGTGGTTTTCCAGCGCAAGTTTCGCCGCCCCATGGACTTGCCAGAGCTCCGAGATCGGCTTGCTGTGATTTGCCGGAGCCACCATAGTAGCTTGATCAAACTTCTTGGGGCATCGGTCTCCGGGAACTACATTTATCTTGTCTATGAGTATGTTCGCGGCGTGAATCTCGCTGATTGTCTCCGAAATCGTTCGAATCCCAGCTTCACTGTTCTGTCGACGTGGCTTTCTCGGATGCAAATCGCGACTGATCTCGCCCACGGGCTTGATTACATCCACCATTTCTCGGGCCTCAACTCGAATTTCGTTCACAACCATATTAAGAGCTCGAGCATCGTCGTCACTGAGGAGACTTTGAATGCGAAGATTTGCCATTTCGGTACCTCGGAATTGTGCGGCGAAATCTTTGCCGCCGAAACACCTTCCGGTTCCGATTCTTCGCAAATCAAGGAGCTGAAAAGGTCCCGTAGCCGGACGGTGAGATTGGAAGGGACGAGAGGGTACATGGCGCCGGAGTATCAGGCGATGGGGATCGCGACGCAGAAATCGGATGTGTACGCATTTGGAGTCGTGGTTTTGGAGCTAATTAGCGGGCAAGAGGCGTTGAAGTACGAATTCGACGACGACGGAGGGTACAGAAGGGTGAGTGTGGTGGAGACGGCGAGGGTGGCGCTGGCGGAGGAAGGTGGTGCGAGGAAGTGGGTGGATAAGAGGCTGAAGGATTCGTTTCCGGTGGAAGCCGCGGAGGAGATGATTCGGGTCGGGTTGGAGTGCGTAGAGGAGAATCCGAATGAAAGGCCGGATATGGGTCGGGTTGCGGTTGCGGTTTCGAAGTTGTATTTGGATTCTAAGAAGTGGGCGGAGAGAATGGGAACGCCCATTGACTTGTCTATCTCATTAGCGCCTCGCTGA 3921 0.4583 MSPVIFFLVLQLLASRCSNGSVSASEGRRKCSVTSIGAVLDLGSRMGKEQKIAMEIAVQDFNRLGCSKLLLNFHDSLGISARAVAFVMDLVHSKQVQAIIGTVTHNEATLATEINNTTKNVPILSLISPAVSTESPSIPLPYFIQVGTDIAIHIRCIAAIVGEFRRRKITAIYEQNDGFSSDHGIRTLLSYSLGLAGSEIDDYLALPSFSSLSNPEVTIEKELSRLKSGSNRVFLIVKSPLEMASLLFKKAKQMGMMERGSLWVMPDEVASLIDSLDSSVIFNMPGVIGFKTHFLEKSETFRQFKFEFRRKFALEYPEDENVNPSIFALRSYDATWVIAQATKKSRGQFSQEEFSERILASHFEGLSGKISHKNGKILQSQTFSLISVIGRSYTDLVFWSPEFGFSKNLVRHQLLEIATNNGSTVVYAPGAYSNEEKTLKIGVPAKGTFTQFVSVTYDHSRNETSITGFSVDVFKAAVKRLPYHLPYVFVPFNGSYDEMVEQVYKKKIDAAVGDIDIMAYRYQYVIFSQPYVDSGLYMVVPVKPNKSKETWLFARTFTKEMWLMMAAMHSFIGIFIWLMERQVNEELRGLGAMFWFLITVLFYVHREPIRHPLTRIVLGPWLFVILVVTTSFTASLTSRITMKQLEPSVLNIKTLLRTNAPVGCNANSFIAKYLMEVLEFQPKNIRRINSISAYLTAFENRDIEAAFFVAPHAKVFLAKYSCEGYIKAGDTLKLGGFGFVFPKGSHLVDDISEAVLHVTESGVIQELEKEMISTVSCSSSESKTQEDGSLGVQPFLGLFCISATIAVLAWLYSIKVLVVRTLRILMRHVQETFAQFRIIWRWIEASMLMSTSGFAKRPNQFHSFFSDEPPLPPAHISPNPNLDLDLSMCKSKNSANVIEPRPRRTRTFQSSSSSRRTTANNLPPSSSSFMLTTDSTSYYNKDWSKASSLSSGASLSSLKESLPENPHIYEFSEISSATGNLKSDKLSSSSSSSSWLCSIRNKEVVVFQRKFRRPMDLPELRDRLAVICRSHHSSLIKLLGASVSGNYIYLVYEYVRGVNLADCLRNRSNPSFTVLSTWLSRMQIATDLAHGLDYIHHFSGLNSNFVHNHIKSSSIVVTEETLNAKICHFGTSELCGEIFAAETPSGSDSSQIKELKRSRSRTVRLEGTRGYMAPEYQAMGIATQKSDVYAFGVVVLELISGQEALKYEFDDDGGYRRVSVVETARVALAEEGGARKWVDKRLKDSFPVEAAEEMIRVGLECVEENPNERPDMGRVAVAVSKLYLDSKKWAERMGTPIDLSISLAPR 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0351 1306 Pfam Protein tyrosine and serine/threonine kinase 1017 1275 IPR001245 GO:0004672|GO:0006468
Dere01g0351 1306 Gene3D - 152 323 - -
Dere01g0351 1306 FunFam Glutamate receptor 434 549 - -
Dere01g0351 1306 Gene3D - 661 735 - -
Dere01g0351 1306 ProSiteProfiles Protein kinase domain profile. 943 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0351 1306 SUPERFAMILY Periplasmic binding protein-like I 36 400 IPR028082 -
Dere01g0351 1306 MobiDBLite consensus disorder prediction 900 928 - -
Dere01g0351 1306 Pfam Receptor family ligand binding region 51 372 IPR001828 -
Dere01g0351 1306 Gene3D - 432 558 - -
Dere01g0351 1306 CDD GluR_Plant 437 772 - -
Dere01g0351 1306 FunFam Glutamate receptor 153 322 - -
Dere01g0351 1306 SUPERFAMILY Protein kinase-like (PK-like) 969 1278 IPR011009 -
Dere01g0351 1306 SUPERFAMILY Periplasmic binding protein-like II 432 769 - -
Dere01g0351 1306 FunFam Glutamate receptor 550 683 - -
Dere01g0351 1306 Gene3D Transferase(Phosphotransferase) domain 1 1057 1294 - -
Dere01g0351 1306 SMART GluR_14 438 774 IPR001320 GO:0015276|GO:0016020
Dere01g0351 1306 Gene3D - 736 769 - -
Dere01g0351 1306 Pfam Ligand-gated ion channel 770 803 IPR001320 GO:0015276|GO:0016020
Dere01g0351 1306 PANTHER OS09G0572100 PROTEIN 888 1306 - -
Dere01g0351 1306 Gene3D Phosphorylase Kinase; domain 1 943 1054 - -
Dere01g0351 1306 Pfam Bacterial extracellular solute-binding proteins, family 3 463 769 IPR001638 -
Dere01g0351 1306 CDD PBP1_GABAb_receptor_plant 35 409 IPR044440 -
Dere01g0351 1306 Gene3D - 29 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0351 Dere-ChrDere01 8282336 8293436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0351 27 811 Ion Channels AT2G29120 31.076 1.26e-110 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere01g0351 ANF_receptor 6.2e-24 CL0144