Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0344 ATGAACAACTCTGTCTCGGATAACAGTTTTTACATTGAAAGTGATGAAGATGAGGAAAAGGAACTACACAAAGGAGAAGATGATGGGAACGATTCAGATTCTTCCAATGATTCAAATGAAAACCAGCAGCAGAACAAGCCCAGTTCGCATAACGTCTCGTGGCCTCAGAGTTACAGGCAGTCAATTGATCTATACAGTAGTGTACCATCACCGAATATTGGATTTCTGGGCACTCCTTCATTATCGAGATTAAGTAGTTCCTTTCTTTCTTCATCTCTAACAAGAAGGCACACTCCTGAAACGCTACCTTCAGCAGCAAAACCTTTGTTACAGCCAACAGCAGATGAGCAACAGAGACGTAGCTCTCATACTTTGCTTCCTCCTCTTCCATCTTGGAGGTCTATGATTAAGAAGGATGCTTCCAAGGTTTCTCACGAAGTTCCAATTCCTCGCCATTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTTCTCTGTGGTGTAGGAATACTTTCCACCCCTTACGCTGCCAAAGAAGGTGGATGGCTTGGGCTTTCTATTTTGTTGATTTTTGCAGTTCTTTCCTTCTATACTGGGATCCTTTTGCGTGCCTGCTTGGACAGTGAACCTGGGCTAGAGACGTACCCTGACATTGGGCAAGCTGCTTTTGGTACAGCAGGACGTATTGCCATCTCGATTGTACTATACGTGGAATTATATGCTTGTTGCATCGAGTATATAATTTTGGAGAGTGATAACTTATCTTCATTATTCCCAAATGCACACTTAAATTTGGGTGGAATTGAATTGGATTCACATGTTCTGTTTGCACTGCTGACCACATTGGCAGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGCATACTCAGTTACATCTCAGCTGGAGGAGTTATTGCATCAATTTTGGTGTCTCTCTGCTTGTTGTGGGTTGGCCTAGTAGATGGAGTTGGATTTGAGCACAAAGGAACACCATTGAATCTTGCAACTCTTCCTGTTGCTCTGGGTGTCTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCGAACATCTATACCTCAATGGCAAATCCAAACCAATTCCCTGCAGTGCTTCTAGCATGTTTTGGTATTTGCACCATGTTGTATGCTGGAGTGGCTGTTATGGGGTATACAATGTTTGGAGATGCTACACTTTCTCAGTTCACTCTTAACTTGCCCCAAAATTTAGTGGCCACCAAGGTTGCCGTCTGGACAACGGTGGTCAATCCATTTACCAAATATCCTTTAAACTAG 1296 0.4329 MNNSVSDNSFYIESDEDEEKELHKGEDDGNDSDSSNDSNENQQQNKPSSHNVSWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSSSLTRRHTPETLPSAAKPLLQPTADEQQRRSSHTLLPPLPSWRSMIKKDASKVSHEVPIPRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGILLRACLDSEPGLETYPDIGQAAFGTAGRIAISIVLYVELYACCIEYIILESDNLSSLFPNAHLNLGGIELDSHVLFALLTTLAVLPTVWLRDLSILSYISAGGVIASILVSLCLLWVGLVDGVGFEHKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTMLYAGVAVMGYTMFGDATLSQFTLNLPQNLVATKVAVWTTVVNPFTKYPLN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0344 431 Pfam Transmembrane amino acid transporter protein 154 430 IPR013057 -
Dere01g0344 431 PANTHER OS05G0424000 PROTEIN-RELATED 162 423 - -
Dere01g0344 431 MobiDBLite consensus disorder prediction 35 55 - -
Dere01g0344 431 FunFam Amino acid transporter AVT1A 151 431 - -
Dere01g0344 431 MobiDBLite consensus disorder prediction 95 124 - -
Dere01g0344 431 MobiDBLite consensus disorder prediction 1 55 - -
Dere01g0344 431 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0344 Dere-ChrDere01 8170093 8177255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0344 1 431 Amino Acid or Auxin Permease AAAP Family AT2G39130 72.603 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0344 01 8170093 8177255 Dere01g0344 01 8170093 8177255 ECH