Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0340 ATGCTTTGGCTTTGGAACCTTCTAAATACAATAATACGAGTTGTGTATATTCTGATTCTGCTCTTTTCTGGTACCATATTCTTTGTCTTGAGTTCAGTTGAAGCTGTACAATCACGAACATATCTTACATTAGATTGTTGTAGACTCAGCCTTGTGAGGCCTTCAAATCCTATGTTTTCTTTCTCTTTCATTGGCCTTCCACTTCCTTCCATGGCTCTAGAAGTTGTCGGTGGACCTTTCATGGGCGCCATCTTCAATGTGCTGCTTGAAAGGGTCGCTTCTTCTGAAGTTGTCAACTCCTTCATGAAGAATAGCTCCGTAAAGTTGCTCAGAAGGTTGAAGATTTCCTTGTTGTCTGTTAATGCCGTACTCAGTGACGCGGAACAGAAGCAAATGAGAAATTCAGCTGTGAAGGAGTGGCTCGAGGAGCTTAAGGATGTCGCGTTTGATGCTGATGATCTCCTAGATGAGATCTACACTGACGCAAAATGCAATGCGAATGAGGTAAACACCCTAGAGTCCACTCCTGTGAAGTTTTTTGATAGAATAGAGGTAGAACGGAAAATAGAAGATGTTCTTGAAAAATTAGAATTCATCATGAAACAGATGGAGGCCCTAGATTTGAGAGTGGGTCGAGAAGTCAAAACGGCACAAAAGACACCAACTTCGTCTGTGATAGAAGCGTGTGATGTGTTCGGAAGGGATAATGATAAAGAGGTCTTAGTCAAGTTGCTTTTGTCACATGATGCTGATGATGACGATGTAGGTGTGATTCCCATAGTGGGGATGGGAGGAGTAGGGAAAACCACTTTAGCTCAACTTATTTACAATGATGATAGAGTAAAGAAAGAATTTGACCTCAAAGTCTGGATTTATGTCTCTGAAGAATTTGATATCTGCAAGATTACCAAAAACCTTCTGGAGGTTATCACTTCTAGGAGTTGTGATTTTGAAGATTTAAATTCGCTCCAACGCAACCTAAAAAGCTTGTTAATGAAGAAAAAATTTTTGTTTGTGTTCGATGATGTTTGGAATGAGAATTATGATAACTGGGACAAGTTGAGGAGTCCATTTAAACATGCAGGGGCTCAAGGAAGTAAGATTGTTGTAACTACACGAAGTAGTTATGTTGCATCTATCATGCAAACTGTACCTGCTTATAATCTCAGTGAGTTGTCAAATGAGGATTCTTGGCATTTGTTTGCAAAACATGCATTTGGTTATAGAGATTCAAATGTCAATCAAAGTATAGAAAAAGTTGGTAGGGAAATAGTTAGAAAGTGCAATGGATTGCCTTTGGCAGTGAAGACACTTGCAGGACTTCTGAGATCTAAAAGTGATAAGCAGGAATGGTATAAAGTATTAGATAGTGAGATATGGGATTTGCAAGATCATGAGAGTAACATTCTTCCAGCTTTAAGATTAAGTTATCATTATCTCCCTGCTCATTTGAAAAGATGTTTTGCTTATTGTTCAATTTTCCCAAAAGATTATGAATTTGAGAAGGAGACATTGATTTTGTTGTGGATGGCAGAAGGCTTGCTGCAGCAATCAAAACGACATAGAAGGATTGAAGATGCTGGATATGAATACTTTTGTGAATTAGCATCTCGATCATTTTTTCAGCAATCAAGACGTGGGAAGGCATGTTTTGTAATGCATCATCTTGTAAATGATTTAGCTCAATTTGCATCGGGAACCTTTTCTGTCAGAATGGAAGACAACAATTCTAATGAAATTGGAGAAAGAACTCGTCATTTGTCACATATTATTGCAGATAGTTCCTCCTGCACAAAGTGGAAGGATGTCAGCAAAGCAAAACGTCTTCGTACCTTTCTGCAAATAAGCTTGGTATGTACATCCATTGACTTGCTCAACAACATGCCAAATGATCTATTGATGAAGTTAAGGTACTTGAGGGTGTTAACCTTAATAAATGGGTATTTGTATAATTTGCCTGATTCAATTGGTGGGCTAAAACATCTTCGCTATCTAGAGGTGTCTGACGTGGAGATGATCAGGTTACCAAAATCCATATGCAGCTTGTACAACTTACAAACACTGAAGTTAGTTGGATGCTATAGTCTCAATGAACTGCCTGAAAAATTGCATGATCTTGTTAACTTGCGTTACTTGGATATTACCGGCACTTGTTTGAAATGGATGCCACTGCAAATGAGCAAATTAGTAAACCTCCAAAAGCTGAGTGACTTCTTTTTAGGGAAACAGTATGGATCTTTGATTTCTGAATTGGGAGAACTAAATGATTTACATGGATCGTTGTTCATTCATCGCTTAGAACATATTGTTGACTACAAGGATTCCGAAAAGGCAAGGTTGAGGGAAAAGAGTTGTCTTGACAAGTTATCCTTGGATTGGTGTGGGAGTGGTGATAGTGATAATTCGCAGCATGAGAAAAACATACTGGCCAGCCTCCAACCACATACAAATTTGAACGAGCTTGTTATCTATGACTATCCAGGCACAGAATTTCCTAATTGGTTGGGGGACTATTCCTTCTCCAACTTGGCGTCTTTACAGCTCAAGGGCTGTAGATATTGCTGTAAGTTGCCCCCACTTGGACAGCTCCCATCACTGAAAGAGCTTCGAATCACTAAATTTGATGGATTAGTGAGTGTAGGCTCTGAGTTTTATGGCAATGAAACTCATCATTCTGCTGTAACTGAGAGCTTCCCTGCACTTGAAATTCTAAGATTTGAGCATATGTCAGCATGGGAGAAATGGAGTCCAGATGTTGACAATGCTGGCCACAAAGCTTTCGGTTTTCTACGTGAAATTCATATAGAGAACTGTCCCAAGTTGACAGGGGACTTACCTAGTAACCTCCCATCTTTGAAGCTACTAATGATCAGAGACTGCCAGCAGCTCCTTTGTTCACTTCCCTCAGCTCCTGAACTGCGTGTATTGAATATTCAGAATTGTGGGAATTTAGAATTCCCAGTACATGTTCATCAGTGCTATCAGCTACTCACATCCTTGTACATACTTGAAAGCTGTGATTCACTCAAGTTCTTGCCATTAGATTTCTTTCCCAACCTGAAGTCTTTAGATATCTGGGGTTGTAAAAATCTGGAAGCACTCACAGTTTTAGAATCAGATGTACCTCCTCCAAATCTCTCATCACTCCGTTCCTTGAGCATAAGGCATTGTCCAAATTTTGTATCGTTTCCCAAGGGAGGATTTGCAGCCCTGAAGCTCACTCTACTGACAATTAATTTCTGCGAGAAGTTGAAGTCTCTGCCTGAACAAATGCACCACCTTATGCCGAGCTTGAAAGAAGTCCAGCTGCGGGGTTGTCCACATATTGAGTCATCTACTATGAGACCACTCAGGATCCGGATTTGTGATAAAGTCAGAGAGGGGAAACAAAATCTATCTGATCCTCTGTATGCTAGGTTTGATGGACTTGGCTCTCTTTGTAGCCCCTCATCAAGTTAG 3459 0.3998 MLWLWNLLNTIIRVVYILILLFSGTIFFVLSSVEAVQSRTYLTLDCCRLSLVRPSNPMFSFSFIGLPLPSMALEVVGGPFMGAIFNVLLERVASSEVVNSFMKNSSVKLLRRLKISLLSVNAVLSDAEQKQMRNSAVKEWLEELKDVAFDADDLLDEIYTDAKCNANEVNTLESTPVKFFDRIEVERKIEDVLEKLEFIMKQMEALDLRVGREVKTAQKTPTSSVIEACDVFGRDNDKEVLVKLLLSHDADDDDVGVIPIVGMGGVGKTTLAQLIYNDDRVKKEFDLKVWIYVSEEFDICKITKNLLEVITSRSCDFEDLNSLQRNLKSLLMKKKFLFVFDDVWNENYDNWDKLRSPFKHAGAQGSKIVVTTRSSYVASIMQTVPAYNLSELSNEDSWHLFAKHAFGYRDSNVNQSIEKVGREIVRKCNGLPLAVKTLAGLLRSKSDKQEWYKVLDSEIWDLQDHESNILPALRLSYHYLPAHLKRCFAYCSIFPKDYEFEKETLILLWMAEGLLQQSKRHRRIEDAGYEYFCELASRSFFQQSRRGKACFVMHHLVNDLAQFASGTFSVRMEDNNSNEIGERTRHLSHIIADSSSCTKWKDVSKAKRLRTFLQISLVCTSIDLLNNMPNDLLMKLRYLRVLTLINGYLYNLPDSIGGLKHLRYLEVSDVEMIRLPKSICSLYNLQTLKLVGCYSLNELPEKLHDLVNLRYLDITGTCLKWMPLQMSKLVNLQKLSDFFLGKQYGSLISELGELNDLHGSLFIHRLEHIVDYKDSEKARLREKSCLDKLSLDWCGSGDSDNSQHEKNILASLQPHTNLNELVIYDYPGTEFPNWLGDYSFSNLASLQLKGCRYCCKLPPLGQLPSLKELRITKFDGLVSVGSEFYGNETHHSAVTESFPALEILRFEHMSAWEKWSPDVDNAGHKAFGFLREIHIENCPKLTGDLPSNLPSLKLLMIRDCQQLLCSLPSAPELRVLNIQNCGNLEFPVHVHQCYQLLTSLYILESCDSLKFLPLDFFPNLKSLDIWGCKNLEALTVLESDVPPPNLSSLRSLSIRHCPNFVSFPKGGFAALKLTLLTINFCEKLKSLPEQMHHLMPSLKEVQLRGCPHIESSTMRPLRIRICDKVREGKQNLSDPLYARFDGLGSLCSPSSS 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0340 1152 Pfam NB-ARC domain 252 457 IPR002182 GO:0043531
Dere01g0340 1152 Gene3D Ribonuclease Inhibitor 597 921 IPR032675 -
Dere01g0340 1152 FunFam Probable disease resistance protein At1g63360 477 563 - -
Dere01g0340 1152 PRINTS Disease resistance protein signature 428 442 - -
Dere01g0340 1152 PRINTS Disease resistance protein signature 947 963 - -
Dere01g0340 1152 PRINTS Disease resistance protein signature 330 344 - -
Dere01g0340 1152 PRINTS Disease resistance protein signature 257 272 - -
Dere01g0340 1152 FunFam Probable disease resistance protein At5g66910 391 476 - -
Dere01g0340 1152 Pfam Rx N-terminal domain 81 166 IPR041118 -
Dere01g0340 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 491 IPR027417 -
Dere01g0340 1152 Gene3D - 88 190 - -
Dere01g0340 1152 PANTHER DISEASE RESISTANCE PROTEIN RP 110 938 IPR044974 GO:0006952
Dere01g0340 1152 Coils Coil 182 209 - -
Dere01g0340 1152 Gene3D - 212 385 IPR027417 -
Dere01g0340 1152 Gene3D - 476 563 IPR036388 -
Dere01g0340 1152 SUPERFAMILY L domain-like 620 1030 - -
Dere01g0340 1152 Gene3D - 391 475 IPR042197 -
Dere01g0340 1152 Gene3D Ribonuclease Inhibitor 1041 1120 IPR032675 -
Dere01g0340 1152 Gene3D Ribonuclease Inhibitor 943 1040 IPR032675 -
Dere01g0340 1152 FunFam Probable disease resistance protein At1g61300 214 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0340 Dere-ChrDere01 8097199 8103329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0340 254 548 WRKY Transcription Factor Family AT5G45050 22.936 7.10e-07 52.0