Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0317 ATGGCGGTCTCTTCAGGACTCCATAACAGTTGGCTAGAAACCACGAGGGTCTTCACCGTCCACCTCATCACCGGCCGGTGGTTCATGATCTTTTCCTCCTTCCTCATCATGTCCGTCGCCGGCGCCAGCTACATGTTCGCCCTCTACTCTCGCGAAATCAAGTCCGTCCTCGGCTACGACCAATCCACTCTAAACCTCCTCTCCTTCTTCAAGGACCTTGGCTCCAACATCGGCATCCTCTCCGGCCTCCTCAACGAGGTCACCCCGCCGTACGTCGTCATCTCCGTCGGCGCCATCCTCAACTTCTTCGGCTACTTCATGATCTGGCTCGCCGTCACCAGCAAACTCCCCGCCCCGCCCGGCGTCCCCCTCATGGCATTCTTCGTCTTCATCGGCGCCAACTCCCACTGCTCGACCAACACCGGCGTTGTCGTTACCTCGGTTAAAAACTTCCCCGGCGCCCGCGGCATCGTCATCGGATTGTTGAGCGGTTACTTGGGTTTGAGTGCGGCGATTATAACTCAGTTATATTACGCCTACTATGGGAACGACTCCAAGTCTCTCATTTTGCTCATGGCTTGGCTCCCTACGGTTATTGCTTTTGCGTTTGTTCCGGTTATAAGACACCACAAGGGGGTTCAGCAGAAGAATGATTCTAAACTTTTCTATAAATTTGTCTATTTGTCACTTCTTCTCGCGGCCTTTCTTCTCGTTATCATCGTACTGGAAAAGTGCTTCAAATTTAACCAAAATGAGTACTACCTTACTTCTTCTTTCATGCTTGTCTTGCTCATCCTCCCTCTTGTGGTTGTCGTTATAGAGGAGCTTAAGATTTGGAAGAAGAATAAACAAGAACCTCAGAAAATAATCATAATCACAGAGAAGCCCAAGATCGAGCCTGAGCCCGCGTCTGAACCTGAGCCCAAGTCCAGGCCTGAAGAAGAGCAAGCTGTCTCCTATTCATGGTGGAGAAACATATTGAGACACCCGGAAAGAGGAGAAGACTATACGATACTCCAAGCAATTTTCAGCCTAGACATGGCGATTTTGTTTTCTGCTACAATATGTGGGCTCGGGGGTTCCCTAACGATGGTGAACAATCTAAGCCAGATAGGGACGGCTCTGGGGTACCCTCCACAAAGCATAACTACATTTGTGTCTCTACTGGCGATTTGGATCTATTTGGGGAAAATAGCGCAAGGGGTAATCTCAGAGTTCATTATTACAAAGCTAAAAGTCCCCAGACCCTTCATGCTCACATCAATTCTCGTCCTTTCATGTGTGGGCCACCTTCTTGTGGCCTTCAACGTTCCAAATGGTCTCTATGTGGCCTCCATTATCATAGGGTTCTGCTTCGGAGCCAACTGGCCTGTACTATTCTCCATTATATCTGAACTCTTTGGGCTCAAGTATTACTCCACGCTTTATAATGTAGGGTCAGTGGCTAGCCCTATTGGGTCATATTTGCTGAGCGTGAGGGTTGCTGGGTATTTGTATGACAAGGAAGCAAGGAGGCAGATGGCAGCATTAGGGTTAACGAGGAAGGAAGGAGAGGAACTGAACTGTAATGGGACTGAGTGCTACAGATTGGCCTTCTTCATTATCACAGGAGTGACCTTGTTTGGGGCTCTTGTGTCCCTTATTTTGGTGGTCCGAACCAGAAGCTTCTACAGAAGTGATATCTACAAGAAGTTCAGAGAGGAAGAACATAATAATGAGACAGAAATGGTTGTGACTCAGAAAGAGGCTGGACCACCTAGTGCGATTGAAGGGTAG 1776 0.4876 MAVSSGLHNSWLETTRVFTVHLITGRWFMIFSSFLIMSVAGASYMFALYSREIKSVLGYDQSTLNLLSFFKDLGSNIGILSGLLNEVTPPYVVISVGAILNFFGYFMIWLAVTSKLPAPPGVPLMAFFVFIGANSHCSTNTGVVVTSVKNFPGARGIVIGLLSGYLGLSAAIITQLYYAYYGNDSKSLILLMAWLPTVIAFAFVPVIRHHKGVQQKNDSKLFYKFVYLSLLLAAFLLVIIVLEKCFKFNQNEYYLTSSFMLVLLILPLVVVVIEELKIWKKNKQEPQKIIIITEKPKIEPEPASEPEPKSRPEEEQAVSYSWWRNILRHPERGEDYTILQAIFSLDMAILFSATICGLGGSLTMVNNLSQIGTALGYPPQSITTFVSLLAIWIYLGKIAQGVISEFIITKLKVPRPFMLTSILVLSCVGHLLVAFNVPNGLYVASIIIGFCFGANWPVLFSIISELFGLKYYSTLYNVGSVASPIGSYLLSVRVAGYLYDKEARRQMAALGLTRKEGEELNCNGTECYRLAFFIITGVTLFGALVSLILVVRTRSFYRSDIYKKFREEEHNNETEMVVTQKEAGPPSAIEG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0317 591 Gene3D MFS general substrate transporter like domains 253 513 IPR036259 -
Dere01g0317 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 562 - -
Dere01g0317 591 Pfam Major Facilitator Superfamily 349 554 IPR011701 GO:0022857|GO:0055085
Dere01g0317 591 Pfam Nodulin-like 26 272 IPR010658 -
Dere01g0317 591 CDD MFS_Mch1p_like 25 543 - -
Dere01g0317 591 SUPERFAMILY MFS general substrate transporter 15 213 IPR036259 -
Dere01g0317 591 SUPERFAMILY MFS general substrate transporter 227 555 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0317 Dere-ChrDere01 7687821 7689596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0317 14 568 Nodulin-like Gene Family AT2G39210 59.213 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0317 01 7687821 7689596 Dere01g0317 01 7687821 7689596 ECH
Dere02g1060 02 10053628 10055496 Dere01g0317 01 7687821 7689596 ECH