Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0302 ATGGGTCGTGATTCTGCAACTTCTCTCGCTCCCGGATTCCGGTTTCACCCCACTGACGAAGAACTCGTTCGTTATTACCTCAGGCGCAAGGTCTCCGGTAAAGCCTTCAAGTTTGACCCAATCGGCGTCATCGACATCTACAAATCCGAACCTTGGGACCTCCCTTGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGTAATGGCTCTAAGACAAATCGCGCCACTGAGAAAGGGTACTGGAAAACTACGGGGAAGGATCGCCCAGTGCGAAACAACTCCCGAATTGTCGGAATGAAGAAGACCCTGGTTTATCATAGTGGCCGAGCGCCGCGTGGTACTCGTACCAATTGGGTCATGCATGAGTACAGACTGACCGATGAAGAATTGGTGAAAGCTGGAATAGTTCAGGATGCTTTTGTGCTCTGCAGGGTTTTCCAGAAGAGTGGTACAGGGCCAAAGAATGGGGAGCGGTATGGTGCCCCCTTTCTAGAGGAGGAATGGGAAGATGATGAGGTGGCTCCAGCCCCAGGTGAAGAGGTTGTCACTGATGAAGTGTTAGTGGGAGATGATATTGATGGTTTTTTTGAAACAAACGACCTTGAGCAGAACCTTGATATGGGCATAGCATCTGAAAGTGCCGGTCTTCCATTGAACTTCCATTGTGGGGAGAGTTGTAGCTATCCTGAGCATTCCCAGGAATTCACTGATGATCAGAAGCCCTTGATAAGCTATGTTGGTGCTTTTGAGCCTCAAGAGGACCAATACTTGAGTATGCCCGAGCAATATTTAGTGGACAGTAAAACAGTGATAGATGAATATAATGGTGAAGCAGGCCATGATGGAAGTACTCTTTATTTCAATCATGCAATTGATGAGCTATTCTGGGATGCTATTGACTATCCTCTGGTTGCTGATGGTTCATTCCTGGAAACCAATGATCTTTCAAATCCCATTGAGGCAGATCCTGATGGTATTGACATGCTTGATGAGTATCTTAAATACTTGGATGCTGATGATGATATTTCCAAATATATATCTTTTGAGTCTCCTCAGATTAAGAGTGAAGACTTTGTTCCTGACCAAGGAGCACCTTTCATCCTGCAGAATGTAAATGAAGAAGACAAGGTTTCTTCCATGGCAAACAAGCAGAATTCCGAAGCACCTTATAGCAATGGAGCTTCATCTTCGAAGCAGAATCCAGAAATGTCAAAATCACTTTCAGGAAATACGAATTCGTTAGCAAAGCAGGCCAGTCACTTGTTGGGCAGCATCCCTGCTCCTCCGGCCTTTGCTTCAGAGTTTCCTCCTAAAGATATTGCTCTTCGGCTTTATTCAGCAGCTCAGTCTTCCAATGCTGATCATATAACTGCAGGTATGATTAGAGTAACTAACATTACTTTTAGAGGTAATGGGATGGACTGGACGCTGGGCAAGAATGGCGAGTTCAACTTTGTAATCCCTTCTGACTTTTCTCAACCTGCTGTTAATTCTGCTGCTCTGGTCCCGGTTTCTGGGTTGCTTTCTGGCAAGAGCTCATTTTTGGTGTCCCATTGCTGGTTTTTCTTAATGCTCTTTTCGGTTCTAATTCTTTCACTGAGTTTCAAGATTGGGAGTTTCATGTATGCTGGTAAATGA 1671 0.453 MGRDSATSLAPGFRFHPTDEELVRYYLRRKVSGKAFKFDPIGVIDIYKSEPWDLPCQSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVRNNSRIVGMKKTLVYHSGRAPRGTRTNWVMHEYRLTDEELVKAGIVQDAFVLCRVFQKSGTGPKNGERYGAPFLEEEWEDDEVAPAPGEEVVTDEVLVGDDIDGFFETNDLEQNLDMGIASESAGLPLNFHCGESCSYPEHSQEFTDDQKPLISYVGAFEPQEDQYLSMPEQYLVDSKTVIDEYNGEAGHDGSTLYFNHAIDELFWDAIDYPLVADGSFLETNDLSNPIEADPDGIDMLDEYLKYLDADDDISKYISFESPQIKSEDFVPDQGAPFILQNVNEEDKVSSMANKQNSEAPYSNGASSSKQNPEMSKSLSGNTNSLAKQASHLLGSIPAPPAFASEFPPKDIALRLYSAAQSSNADHITAGMIRVTNITFRGNGMDWTLGKNGEFNFVIPSDFSQPAVNSAALVPVSGLLSGKSSFLVSHCWFFLMLFSVLILSLSFKIGSFMYAGK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0302 556 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 372 - -
Dere01g0302 556 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Dere01g0302 556 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Dere01g0302 556 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Dere01g0302 556 MobiDBLite consensus disorder prediction 386 421 - -
Dere01g0302 556 FunFam Nac domain-containing protein 86 18 162 - -
Dere01g0302 556 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0302 Dere-ChrDere01 7495572 7498429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0302 1 554 NAC Transcription Factor Family AT5G04410 44.710 5.20e-144 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere01g0302 NAM 1.4e-36 No_clan