Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0300 ATGTCATCATCGGGAGAGGAAGCTGCTTGGTCTGTCATTGAGGATGAATCAAGCAAATCTCCGACCCCATTTGATGAAAGGAGTGGCTATAATTCAAGAACAGGCATATATCATTCTCATTTTAAGCTTAGTGCCAAGCATAAAATCCCCAAAAGGTCTGACCTTGACATTGCAAGCCTAATTCTATCACACTTCCCTCATGCACACCAGCTTGCTGATAAAAAGCCCGCCTTCATTGATTCTTCTACTAACCAAACTATTAGCTATGGTGAACTTCACAGCTCTGTTTACTCCCTTGCATCTGCTTTATTCCATGGACTCGGGGTCCGAAAAGGCACTGTGGTGTTTGTTCTGTCCCCAAACTCAATCTTGTATCCAACCATCTGCCTAGCTGTGTTATCAGTAGGAGCAATTCTTACCACAGCAAATCCTCTTAACACAGAATCAGAAATTGCCAAGCAAGCGAAAGATTCAGGTGCTAAACTAGCCATTTCAGCACCTGAGGTGCTGAACAAACTTGCAGCAACTGCGGTTCCTATAATTCTCACAACTCGTCCATTGGATGGCCGAATGGTATCAATTGAAGAGTTAATAGAAGGCTGCTCTGATAATAGCCCACAAGAGCGGCCTCATGTTCATATAGCTCTGTCAGACACTGCAGCTATATTGTACTCTTCAGGCACCACTGGGATGAGCAAAGGTGTGGTTTTGACACATGCTAATCTCATATCCATCATGTGGTTACTGATATGGTCTACAGATGCAACTTCATCCCAAGATGATGTATTTTTAGGATTCATCCCAATGTTTCACATTTATGGGCTGATGTTTTTTGGATTGGGATTGTTGTGTATGGGTGTTACATCAGTTATAATGCAGAAATTCGACTTCAAAGATATGCTTTTTGCAATTCAGAAGCACAGAGTCAATAACATACCAGCAGTGCCTCCAGTGATTCTTGCTCTAGTGAAATATGCAAGCAAAGCTGAGTGTGACTTGTCAAGCCTGAGAAAAGTAGGTACTGGTGCTGCACCTTTGAGTAAGGAACTAGCTAAGGAGTTCAGAAAGATATTTCCTTGGGTTGAGCTGAGGCAAGGCTATGGACTAACAGAGAGTTGTGGTGCAGCAACCTTTTTCGTGTTAGACAGAGATGCTAAAGCACGGCCCGGTTCAAGTGGGAGGCTAATTCCAACCTTTTGTGCCAAAATTGTGGACACTGAAACAGGGAAGACTTTGCCTCCGGGAAAGGAAGGAGAGCTATGGCTTAAAAGTCCTACAATTATGAAAGAATATCTGGGAAACATGGAGGCAACAGCTGCAACACTTGATTCAGAAGGGTGGTTAAAAACAGGTGATCTTGCTTATGTTGATGAAGATGGATTTGTCTATATACTTGAACGAATAAAGGAGCTGATCAAGCACAATGGGTATCAGGTTGCTCCTGCAGAACTTGAAGCAGTGCTGCTCAGCCATTCCAATATTGTCGATGCAGCTGTTATACCGGTTGAAGATGTAGAAACTGGACAGATACCAGTGGCATATGTGGTAAGAGCAGCTGGCTCTGAGCTCACACAAGACCAGGTCATTCAATTTGTCGCCAGCCAGGTGGCCCCATATAAGAAAATAAGAATGGTAAGTTTCATTGATACTATTCCAAGGTCAGCTGCAGGCAAAATCTTGCGCAAGGATCTTGTTTCACGCAGCAAAAATCAACATACGTTCAAAACTGAAGAGAAGTATGTAACTTTTGGTACTCAAATGCCATCTCTTTGGGTTCTCCAGATGCAGCTTGGGTGGATTGTAGCTGTTAGAATTGTTGCATTAAAACAGTGA 1833 0.4304 MSSSGEEAAWSVIEDESSKSPTPFDERSGYNSRTGIYHSHFKLSAKHKIPKRSDLDIASLILSHFPHAHQLADKKPAFIDSSTNQTISYGELHSSVYSLASALFHGLGVRKGTVVFVLSPNSILYPTICLAVLSVGAILTTANPLNTESEIAKQAKDSGAKLAISAPEVLNKLAATAVPIILTTRPLDGRMVSIEELIEGCSDNSPQERPHVHIALSDTAAILYSSGTTGMSKGVVLTHANLISIMWLLIWSTDATSSQDDVFLGFIPMFHIYGLMFFGLGLLCMGVTSVIMQKFDFKDMLFAIQKHRVNNIPAVPPVILALVKYASKAECDLSSLRKVGTGAAPLSKELAKEFRKIFPWVELRQGYGLTESCGAATFFVLDRDAKARPGSSGRLIPTFCAKIVDTETGKTLPPGKEGELWLKSPTIMKEYLGNMEATAATLDSEGWLKTGDLAYVDEDGFVYILERIKELIKHNGYQVAPAELEAVLLSHSNIVDAAVIPVEDVETGQIPVAYVVRAAGSELTQDQVIQFVASQVAPYKKIRMVSFIDTIPRSAAGKILRKDLVSRSKNQHTFKTEEKYVTFGTQMPSLWVLQMQLGWIVAVRIVALKQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0300 610 Pfam AMP-binding enzyme 74 473 IPR000873 -
Dere01g0300 610 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Dere01g0300 610 MobiDBLite consensus disorder prediction 1 31 - -
Dere01g0300 610 Gene3D - 470 573 IPR045851 -
Dere01g0300 610 SUPERFAMILY Acetyl-CoA synthetase-like 60 570 - -
Dere01g0300 610 MobiDBLite consensus disorder prediction 15 31 - -
Dere01g0300 610 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 565 - -
Dere01g0300 610 CDD 4CL 49 564 - -
Dere01g0300 610 Gene3D - 43 469 IPR042099 -
Dere01g0300 610 FunFam 4-coumarate--CoA ligase 2 470 571 - -
Dere01g0300 610 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Dere01g0300 610 FunFam Long-chain-fatty-acid--CoA ligase FadD 46 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0300 Dere-ChrDere01 7471406 7474653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0300 25 564 Monolignol Biosynthesis Gene Families AT1G20480 45.863 1.32e-156 459