Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0297 ATGGCTTTCCCGCTTCTTATCCTTCTCTTCCTCCCCATTCCATTCACGGCTTCAACTCAGCTTTCCCTCGACTACTACAAGACAACATGTCCTAAATTCCAGGAGATCGTGAGAGAAGCCGTGTTCACCAAGCAATCTTCCATTCCCGCCACCGCCCCCGGCGTCCTCCGCCTCTTTTTCCACGACTGCATCACCGACGGCTGCGACGCCTCCATCCTCATCAGCTCCAACGGCTACATGAAGGGCGAGCGCGATGCCGACCTCAACCTCTCCCTCTCCGGCGACGCCTTCGACCTCATCGTCAAGATCAAGAACGCACTCGAGCTCGCCTGCCCCGGCGTCGTCTCCTGCGCTGACATCATGGCCCAATCGACCCGAGATCTCGTGAAGATGGTGGGTGGGCCATTCTACAATGTACCCTTGGGTCGTAAAGACAGTCTCTCATCGAACGCTTCGAAAGTCGATGCCGCCCTCCCCAGGCCAGAATACACCATGGACAAAATCATCCAGAAATTCACCGTCAAGAATTTCACAATCCAAGAGATGGTCGCTCTCACCGGTGCCCACACCATCGGATTCACCCATTGCAAGGAGTTCGCTCACCGGATCTTCAATTTCAGCAAAACCTCCGAAGTAGATCCCACCATTCACCCAAAACTCGCCGAAGGATTGAGGAGGATCTGCGCAAACTACACAAAAGACCCAGCAATGTCAGCATTCAACGACATGCGATCACCCAACAAGTTCGATAACTCGTATTTCCAGAACGTATTGCACGGATTAGGGCTTTTGAGCTCTGATTCGCTTCTCGGAAGAGACCCGAGGACGAAGCCTATTGTTGAGAAATACGCGACAGATCAGAATGCATTCTTCCAGGATTTCGCGAAGACAATGGAGAAGTTGGTGGTACTTGGTGTGAAGACAGGGAACGAAGGTGAAGTAAGACACAGGTGTGACCAGTTCAACAATATGGTTCCCACAATATAG 987 0.5228 MAFPLLILLFLPIPFTASTQLSLDYYKTTCPKFQEIVREAVFTKQSSIPATAPGVLRLFFHDCITDGCDASILISSNGYMKGERDADLNLSLSGDAFDLIVKIKNALELACPGVVSCADIMAQSTRDLVKMVGGPFYNVPLGRKDSLSSNASKVDAALPRPEYTMDKIIQKFTVKNFTIQEMVALTGAHTIGFTHCKEFAHRIFNFSKTSEVDPTIHPKLAEGLRRICANYTKDPAMSAFNDMRSPNKFDNSYFQNVLHGLGLLSSDSLLGRDPRTKPIVEKYATDQNAFFQDFAKTMEKLVVLGVKTGNEGEVRHRCDQFNNMVPTI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0297 328 Gene3D - 24 322 - -
Dere01g0297 328 SUPERFAMILY Heme-dependent peroxidases 20 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Dere01g0297 328 PANTHER - 3 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 ProSiteProfiles Plant heme peroxidase family profile. 20 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 Pfam Peroxidase 48 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Dere01g0297 328 FunFam Peroxidase 159 301 - -
Dere01g0297 328 FunFam Peroxidase 24 170 - -
Dere01g0297 328 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere01g0297 328 Gene3D Peroxidase, domain 2 159 301 - -
Dere01g0297 328 CDD secretory_peroxidase 20 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0297 Dere-ChrDere01 7453239 7454225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0297 4 324 Peroxidase AT5G47000 55.077 2.17e-128 368