Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0293 ATGTGGCCTTCCATGAAGTTTAATGAAGAGGCACATTCACCATTTGTCAAGAAGTATGAGACCAACGGAACAGCCTGGAAACCGAAAAGAACAATAGGGGAAGCTGGAAACCAAAAGGAACAATGGGGAGAAGCTAGCTTTCCATCCTATGGTCCCCAAAACACGCTTAATGAACTACTACCACCGAAGAAGAAGCGAAACCTCCCGAGAATGCTAGATTTAGATGTTAGGAAACATGGTGAAAAGAAGTGGAAATGCGAGCGATGCTCCCAGAAATACACGGTACAGTCTGATTGGAAGGCCCATATGAAAACTTATGGAACTAAAAAGTACAAATGTGACTGTGGCTCCTTATTCTCGAGAAGGGATAGCTTAATTATGCACAGGGCTTTTTGTGATGCCTTAGTGGAGGAGAGTGCTCGAGCCCAAACTTTAACTATTAGTGGCGGCTCCAAGGGGAACTTAAATAGGAAAGTTATTATAGCTTCACCACTGCAACCTCCCCTTACTCCTTTTATGTCTGTGGCCTTTCCTGCTTTGCTTAGCAACTGCATCTCCTCTGCACAAGATGATAGTACTTCATCACAATGGAATAACCATGTAAAGACAGAAAATCACTCGCTAATTGATGATGGCCTCTTACTCGGAAGTCCTTCTGCTGGGAATGCAGGTTACGCAAACATGATGATGGGCTCGTCTTCGCCATTTAAAGGACAACCCATGACTCGTGATCTTTTTGGTCTAAGCATAGGTGGTGTTGGTGGCAGGACTAGCAGCAGGGGTGGTCTTTTTGCTTTACTCAGCTCTTTTGGAAGGAGATTTGATGTTGTAGATTCATCAACGCGAGGGAGGAGTTACAACAGTTGTTTGAAGATATGTTTCAAGGAGACGTTGGAAGTGACTCCCACACTGTTGCTGCTTGTTTTACTTCATCTACCTACGTGCATATAG 951 0.4416 MWPSMKFNEEAHSPFVKKYETNGTAWKPKRTIGEAGNQKEQWGEASFPSYGPQNTLNELLPPKKKRNLPRMLDLDVRKHGEKKWKCERCSQKYTVQSDWKAHMKTYGTKKYKCDCGSLFSRRDSLIMHRAFCDALVEESARAQTLTISGGSKGNLNRKVIIASPLQPPLTPFMSVAFPALLSNCISSAQDDSTSSQWNNHVKTENHSLIDDGLLLGSPSAGNAGYANMMMGSSSPFKGQPMTRDLFGLSIGGVGGRTSSRGGLFALLSSFGRRFDVVDSSTRGRSYNSCLKICFKETLEVTPTLLLLVLLHLPTCI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0293 316 Gene3D Classic Zinc Finger 76 145 - -
Dere01g0293 316 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 77 169 IPR031140 -
Dere01g0293 316 SUPERFAMILY beta-beta-alpha zinc fingers 79 128 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0293 Dere-ChrDere01 7374650 7376370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0293 77 142 IDZ Gene Family AT1G55110 84.848 1.33e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere01g0293 None None None