Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0279 ATGTTGGCTATGGAGAAGGATTTTGATTCTAAGTTGAGGATTCAGGAGAATTCGTCTAATGATGGGAATGTGCAGAGATCTAAGAGCTTTGCATTCAGAGCCCCTCAGGAGAATTATACCATTCAGGACTTTGAATTGGGAAAGATCTATGGTGTTGGCTCCTATTCCAAGGTTGTGAGAGCAAAAAAGAAGGACACAGGGGTTGTGTATGCATTGAAGATCATGGATAAAAAGTTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTGCTTGATCAGTTGGACCATCCTGGCATTGTGCGGCTATTTTTCACATTTCAAGACACATTTTCTATTTACATGGCGCTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCCGGAAAGGTCGTTTGTCAGAGGATGAAGCTCGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAGTTTGGGATTGATACACCGTGATATTAAGCCAGAGAACTTGTTACTTACGGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCGATGCAGGACAGCCGGATCACAGTTCTTCCAAATGCAGCAGCATCAGATGATAAGGCCTGCACGTTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCTCTTGGATGCACATTATATCAAATGCTTTCGGGAACTTCTCCTTTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATAGCCCGAGATATTCGATTTCCAGATTACTTTTCCGAGGAAGCAAGAGATCTTATTGACCGGTTACTGGATTTAAATCCTCTGAGGAGACCAGGCGCAGGACCTGATGGTTATGGTGTTTTGAAAATGCATCCATTTTTCAAGGGAGTAGACTGGAGTAACATAAGGGAACAAAGCCCCCCAAAACTTGCTCCAGAAGCAGGGGGTCATTCTCCTGAGCATCAGGATTCATCATGGAATCCTCAGGATGGTTCTGGTAAACCTAATGGACATACTGGTGCTACATCTTCTGATGGGAATGCTCATGTTACCAGGCTTGCTTCAATTGATTCCTTCGATTCGAAATGGCAACAGTTTTTGGAACCTGGTGAATCTGTTCTTATGATCTCAATGGTGAAGAAATTACAGAAACTGACAAGCAAGAAGGTGCAGCTCATCCTTACTAACAAGCCAAAGTTGATCTATGTTGACCCAGCAAAACTAATTGTAAAGGGAAATATGATATGGTCTGATAATCCTAATGATCTTACTGTCCAAGTGATTAGTCCTTCACTTTTTAAGATTTGCACACCAAAAAAGGTAATGTCATTTGAAGATGCAAAGCAAAGGGCATGGCAGTGGAAAAAGGCAATTGAGGGGCTTCAAAACCGCAGCATTCGCAGTACCATTGGGCAGAAGAAAGCCACTGAAAGTGATAAAGGAAGTGAACCAATTAATGCAGCAGCAGTGATACAACAAATGGTTGTGTTTGAGATAATTGGAATAATCCATTTTGGCATAGTTGGAAGTGCAAATGACTCCATTTCCTTTGGAGATGTTACCATTCCCAAACAGTTCATTCAAACTGGCTTATGGGATTGGCTGAAACCTAATGGGACACTTGAGAGTAGTGACTTTGGTCACTTGGATTTTGGAAACTTCAATGTGAATGTGCCCAAAGGAGAGGGCAACAATTTGCTGAAGAATTCTTCCCTGTGA 1773 0.4162 MLAMEKDFDSKLRIQENSSNDGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSIYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSEEARDLIDRLLDLNPLRRPGAGPDGYGVLKMHPFFKGVDWSNIREQSPPKLAPEAGGHSPEHQDSSWNPQDGSGKPNGHTGATSSDGNAHVTRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPAKLIVKGNMIWSDNPNDLTVQVISPSLFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNRSIRSTIGQKKATESDKGSEPINAAAVIQQMVVFEIIGIIHFGIVGSANDSISFGDVTIPKQFIQTGLWDWLKPNGTLESSDFGHLDFGNFNVNVPKGEGNNLLKNSSL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0279 590 Pfam PH domain 379 482 IPR033931 -
Dere01g0279 590 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Dere01g0279 590 MobiDBLite consensus disorder prediction 338 364 - -
Dere01g0279 590 MobiDBLite consensus disorder prediction 323 364 - -
Dere01g0279 590 FunFam 3-phosphoinositide-dependent protein kinase 1 353 482 - -
Dere01g0279 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Dere01g0279 590 SUPERFAMILY PH domain-like 306 483 - -
Dere01g0279 590 Gene3D - 354 487 IPR011993 -
Dere01g0279 590 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0279 590 SUPERFAMILY Protein kinase-like (PK-like) 27 329 IPR011009 -
Dere01g0279 590 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0279 590 SUPERFAMILY Purine and uridine phosphorylases 502 548 IPR035994 GO:0003824|GO:0009116
Dere01g0279 590 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Dere01g0279 590 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Dere01g0279 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 339 - -
Dere01g0279 590 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Dere01g0279 590 Coils Coil 462 482 - -
Dere01g0279 590 Pfam Protein kinase domain 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0279 590 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0279 Dere-ChrDere01 7218919 7233842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0279 1 482 AGC Kinase Gene Family AT3G10540 82.004 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Dere01g0279 Pkinase 1e-63 CL0016