Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0270 ATGGGAACATTGAAATTTTCATTAATTTCTATTTACTTGGAAATTAAGATATTCACTTACCACTGCCTTTCCTTTTCTGTGATGAGTTGCTGCTGCCTGTTGTTTAGGGTGAACCGTCACCGCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCGGAGGCAGAGTCGCATTGCGTACTCGTTGCAGTGGGTTCGTCTTCGCCGCCATGGCTGCGCCGAAGCCACGCAGTACTCGATCAAGGTCTCTTAGGGACGCCTCTGACTCCTCCAAGATGGAGGGCACCGGTACCTGGGATGCCCTCCAATGGACCAAGTTTGAGCCCCGTTCACGCTACGTTTCGCATGCCAATTTGGATTTCTTGCTTGAGGAAGAACAAGTCATGGCCGAGGGACATGGTGTTGTTCTTATTAATTCAGATGATGCAGGCACATTAATGGTAACAAATTTTCGCCTTATTTTTCTGAGTGATCGAACTAGAAATATTATTGCCCTCGGAACAATTCCACTTGCAACGATTGAGAAATATAACAAGATAGCTGTAAAGATTCAGTCTGCTAATCGTCAATCAGACAAGACACCTCCACAAAGACTGCTCCAGGTTATTGGAAAAGATATGAGAATTATAGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGTGATATTTGATGCCTTACTAAGAATTACAAAGCCGGCCGGACTATGGGAACTTTATGCATTTGTATCTGGACCTTCTAGGTTTACTAACTCTAATCCAAAGGTACGCTTACTAGATGAGTATTTCCGGCTTCTTGGAAAACACTTATACCGTGCTTCGATGAATATGATTGAAAGTGGGTCCTATACCTTATCCAATGACTTGTGGAGAATAAGTAGTGTGAACTCCAACTACAAAATGTGTCAGAGTTATCCATTTGCTTTGATAGTACCAAAGGGCATCAGTGATGATGAAGTGCTTCAAGCTTCCAGCTTTCGAGGAAGATGTCGGCTGCCTGTAGTTTCATGGTGCCATCCAGGTACCGGAGCAGTCCTTGCACGTTCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTAGTGGCTGGATTTTGCAGCAGACTTAGTGATGGCTCACGCAGGAAGCTATATATAGCCGATGCAAGACCAAGGAAAAATGCATTAGCTAATGGGGCTATGGGAGGTGGTTCAGAATCATCTTCAAATTACTTCCAATCTGAGATAGTTTTTTTTGGCATAGACAACATTCATGCAATGAGAGACAGCTTTGCTCGGCTGAGAGAATACTTAGATACTCATGGCAGAGCATCATCAGATGGAATGTCATCTTTTTTGAGGCATGGTGGGTCGACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACTTCAGTATCATCGCTTGGGGACAGTGGATGGCTATTACACGTTCAAAGTGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTGATATGGAAAAGGCTTCTGTTCTTGTCCATTGCAGTGATGGATGGGATAGAACTAGTCAGTTGGTTTCTCTTGCTAATTTGTTGCTTGATCCATACTATCGCACAATCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTTTCAGATCGTATGGGAATGCCATCGGTCTCTGGAAGTGGCAACATGCCTTTTGAGTTGACTAGACAGTCTTCTACTGGAAGTTGCCCATCACCTCCCATGCGCCAGTCATCAGGAACATTCACATCTCAATCCCCTACTTCTCATGCACAGACTTCAAACAACTACTCTCCCATTTTTTTGCAGTGGGTTGACTGTGTTTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAGTTCTCCTCGGCTTTCCTGGTGGACTTCCTAGACTGTGCTTTTTCTTGCCGATTTGGAAACTTCTTATGCAATAGTGAGAAGGAAAGACAGCAATGCAATATTTTTGAAGCTTGTGGCTGTTTGTGGGCATACTTGGCTGACTTGCGTGCTTCTGAAGGAGCTTCTCATGTGCATTATAATCTCTATTATGATCCATCGAAGCACAACGGTCCTCTTTTTCCACCAGCAGCAGCTTTAGCCCCAACTCTGTGGCCCCAATTTCATCTTCGCTGGGCTTGCCCAGAGGAAGCACAAGCTGTGGGTGAAATTGAAGCAAAATGTAGGCAGATGGTTCTGAAATACTCTGAGATGCAGAAGGCTAAAGAATTGGCAGAGAGGAAAGCTAAAGAAGCTGAAATTGCCATGGAATCGTTGAGTGCAGAATTACGAAATGAGAAGCAGTTAAGCCGCTCAGCTATGAACATGACCAAGAGAACAAGCAAAGAAAATGTGGCCATAAAGCGAGCAATTCAGTCACTGGGCTGCAAGTTTCAATTCTTTGATAATGGGGATTGTGTTTTTGATATTGAAAGCAACTTAGTGGGGGCACCACAAACCATTATGTATCCTTCCACAAGGAAGGATTTGGATAGTACATTGGATGAAGACAAGAAGGACCTACCTGTTTCAGTAGCAGTTACGGCAGATGATGATTATGATGATCATGCAAGCAATGCTTTTGTTCAAGTATGTGACGCTCTATGCCCATTTCGTACTCCAAATGGACGCTGCAGGTGGCCAAATGCTGGTTGTGCACAACTAAGTAATCAGTTTGTCGGTGTAAGGGCAAATTTTGATGCATTTGAACAATTGTCAATTGATGATAGTTATTTTAAATCTGAATGA 2772 0.439 MGTLKFSLISIYLEIKIFTYHCLSFSVMSCCCLLFRVNRHRALSLSLSLSLGGRVALRTRCSGFVFAAMAAPKPRSTRSRSLRDASDSSKMEGTGTWDALQWTKFEPRSRYVSHANLDFLLEEEQVMAEGHGVVLINSDDAGTLMVTNFRLIFLSDRTRNIIALGTIPLATIEKYNKIAVKIQSANRQSDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRITKPAGLWELYAFVSGPSRFTNSNPKVRLLDEYFRLLGKHLYRASMNMIESGSYTLSNDLWRISSVNSNYKMCQSYPFALIVPKGISDDEVLQASSFRGRCRLPVVSWCHPGTGAVLARSSQPLVGLMMNMRSNADEKLVAGFCSRLSDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTHGRASSDGMSSFLRHGGSTWGGGNLSSMSTSVSSLGDSGWLLHVQSVLAGAAWIAARLDMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTITGFQALVEKDWLAFGHPFSDRMGMPSVSGSGNMPFELTRQSSTGSCPSPPMRQSSGTFTSQSPTSHAQTSNNYSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDFLDCAFSCRFGNFLCNSEKERQQCNIFEACGCLWAYLADLRASEGASHVHYNLYYDPSKHNGPLFPPAAALAPTLWPQFHLRWACPEEAQAVGEIEAKCRQMVLKYSEMQKAKELAERKAKEAEIAMESLSAELRNEKQLSRSAMNMTKRTSKENVAIKRAIQSLGCKFQFFDNGDCVFDIESNLVGAPQTIMYPSTRKDLDSTLDEDKKDLPVSVAVTADDDYDDHASNAFVQVCDALCPFRTPNGRCRWPNAGCAQLSNQFVGVRANFDAFEQLSIDDSYFKSE 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0270 923 Gene3D - 131 230 IPR011993 -
Dere01g0270 923 ProSiteProfiles Myotubularin phosphatase domain. 266 717 IPR010569 -
Dere01g0270 923 CDD PTP-MTM-like 329 619 - -
Dere01g0270 923 Coils Coil 743 777 - -
Dere01g0270 923 ProSitePatterns Tyrosine specific protein phosphatases active site. 506 516 IPR016130 GO:0016311|GO:0016791
Dere01g0270 923 SUPERFAMILY PH domain-like 120 242 - -
Dere01g0270 923 PANTHER MYOTUBULARIN-RELATED 91 825 IPR030564 -
Dere01g0270 923 Pfam Myotubularin-like phosphatase domain 253 659 IPR010569 -
Dere01g0270 923 SMART gram2001c 109 179 IPR004182 -
Dere01g0270 923 MobiDBLite consensus disorder prediction 572 602 - -
Dere01g0270 923 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 281 721 IPR029021 -
Dere01g0270 923 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0270 Dere-ChrDere01 7114450 7136653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0270 69 921 Protein tyrosine phosphatase (PTP) family AT3G10550 65.888 0.0 1150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g0270 01 7114450 7136653 Dere01g0270 01 7114450 7136653 ECH