Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0269 ATGGCTACTGAGGACTTCTCTCTCCTCGACTCCCCCTCCCACCACCCCCACTCGCAGCCTCTCCTCCACGCTCACACGCGCCACTTCCCTTCTCCATCCTCGTCTAGTCCCACCACCGGAGTCCCTCCTACCTCCGCGGATGCCGGCGACTCCGCCAACGCCGACTACTACACTCAACCGTTTCACGACGACGGCGGAGACGCCGAAGATTCCTCTGACCCGAACAAATCCACGTCCGGAGTCCTGACCCCTAATTCGAAGCGTACGGCCGCCGATAGCCCCTATTACTATAACAAAAAGTTGAAATCCTCCGCTGCCGGTGCCGGAGGCAGCGTAGCTACGAGCGCTGCAGCTGATTCAGGAACCGAAGGGACGTATCGGATCGATTACCGGAAGGATCGTGAGGAATGGAGCGACGCGGCGATCGCGTGTCTCCTGGACGCGTACACGGAGAAACTGAACCAGCTGAACCGCGGGAATCTACGAGGACGAGATTGGGAGGAGGTGGCGCAAGCCGTCAGCGAGCGTTGCCCCGTTGGTGGCGGCGTTGATGGAAAGAACAAATCGTATAAGAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAGGATAAGTAATGGCAGCATCACCACGAGTAATTGGCATTGGTTTAAGAAGATTGAAGCTATTGTTGGGAACTCATTGACTGTGAAGACGGTGTCAGATGATGAGAAGAGCGGTGGAGCTAATTCCTTGTCTGTGGCTAGACGTCCAAAAAACCGATATACACCAACCAATGTTGCAGTGGTGAACAACCTGAAATCAAAACCAGCATCTAATCTTAAATGGCATAGAGTTGTGTTTAAAATCAGCGGTTCTGCATTAGCTGGGAACTGCCAAAGTATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTAGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTCTTTTGTGGAGATTCGTGGGTCTCTGCTACTGGGTTGGATAGACCTATGGCTTACCAAATTGGTATGATGGCAACGGTTATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAGCTGGGTATTCAGGCACGTGTTCAGAGTGCATTCTCTGTGCCAGAGGTTGCTGAACCTTATAGCAGGCAACGAGCTATCCGACATCTGGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTTGGTGCTGGCACTGGAAATCCGCTGTTTACCACTGATACAGCTGCAGCTCTGAGAGCTTCTGAGCTTAATGCAGATGCTATGCTGAAAGGTACCAATGTTAATGGTGTCTATGATTGCCATACCAGCGGTGACAATGTGACACTCGATCACATTTCATTTAGGGATGTTGCTTCTAGGGGCATCACTTCCATGGACATGATGGCACTAGCATACTGTGAAGAGAACGGAATTCCTGTTGTAGTCTTCAACATGCTTGAATCGGGGAATGTTTCAAGAGCACTGTGTGGAGATCAAGTTGGCACGTTGATTGATCAAACAGGAAGTATTAGTTAA 1575 0.5041 MATEDFSLLDSPSHHPHSQPLLHAHTRHFPSPSSSSPTTGVPPTSADAGDSANADYYTQPFHDDGGDAEDSSDPNKSTSGVLTPNSKRTAADSPYYYNKKLKSSAAGAGGSVATSAAADSGTEGTYRIDYRKDREEWSDAAIACLLDAYTEKLNQLNRGNLRGRDWEEVAQAVSERCPVGGGVDGKNKSYKSVEQCKNKIDNLKKRYKVELQRISNGSITTSNWHWFKKIEAIVGNSLTVKTVSDDEKSGGANSLSVARRPKNRYTPTNVAVVNNLKSKPASNLKWHRVVFKISGSALAGNCQSIDPKVAMQIAREVATACRLGVEVAIVVGGRNFFCGDSWVSATGLDRPMAYQIGMMATVMNSILLHSALEKLGIQARVQSAFSVPEVAEPYSRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELNADAMLKGTNVNGVYDCHTSGDNVTLDHISFRDVASRGITSMDMMALAYCEENGIPVVVFNMLESGNVSRALCGDQVGTLIDQTGSIS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0269 524 MobiDBLite consensus disorder prediction 28 46 - -
Dere01g0269 524 MobiDBLite consensus disorder prediction 72 90 - -
Dere01g0269 524 Coils Coil 186 213 - -
Dere01g0269 524 FunFam Aspartate/glutamate/uridylate kinase family protein 137 209 - -
Dere01g0269 524 SUPERFAMILY Carbamate kinase-like 285 517 IPR036393 -
Dere01g0269 524 Gene3D - 277 523 IPR036393 -
Dere01g0269 524 FunFam Uridylate kinase isoform A 278 523 - -
Dere01g0269 524 PANTHER URIDYLATE KINASE 130 523 - -
Dere01g0269 524 Hamap Uridylate kinase [pyrH]. 284 518 IPR015963 GO:0005737|GO:0006221|GO:0033862
Dere01g0269 524 MobiDBLite consensus disorder prediction 1 90 - -
Dere01g0269 524 Gene3D - 137 209 - -
Dere01g0269 524 Pfam Myb/SANT-like DNA-binding domain 134 233 IPR044822 -
Dere01g0269 524 Pfam Amino acid kinase family 288 497 IPR001048 -
Dere01g0269 524 CDD AAK_UMPK-PyrH-Ec 288 518 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0269 Dere-ChrDere01 7109668 7112605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0269 137 244 Trihelix Transcription Factor Family AT3G14180 41.667 2.03e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere01g0269 AA_kinase 1.5e-26 No_clan