Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0246 ATGGTAGGTATGGAGGAAGCCATGGGAGGAGATAATGGAGGTGGGGTGATGAGGTCAGTGAGCAGCAGCTTGAGGATGAGCATAGGGTCAGGAAGCAGAAGGAGCTGGGCATCAGAAACTCTCAGAGATTCATGGACTGGACATGGAGGTGTGTTTGAGAGGAGTATGAGGAGAGAAGATGAAGAAGAGCTGAAATGGGCAGCCATAGAGAGGCTTCCTACATTTGAGAGGATGAGGAAAGGGATGATGAAGAAGATGCAGGTTTTGGATTGTGGGACTGTTGATTATGAAGAGGTTGATGTCACCAAGCTTGGATTGCACCAGAAGAGGCATCTCTTGGACAGTATTCTGAAGAATGCTGAACTAGATAATGAGAAGTTCTTGCAGAGACTCAGAAATAGGATTGATAGGGTTGAAATAGAGATTCCTAAGATTGAAGTTCGATTTGAGCATTTGTTTGTAGAAGGGGATGCATATATTGGAACCAGAGCACAGCCAACACTAGTGAATTCTACCATGAATGCAATAGAGGGGATTCTTGGATCAATTAAGCTTTTCCCATCCAAGAAAAGGGCTGTCAAGATACTCCAAGATGTCAGTGGAATCCTGAAGCCTTCAAGAATGACTTTACTTTTGGGGCCTCCAGGATCAGGGAAAACTACACTGCTTAAGGCACTTGCAGCCAAATTAGACAAGGATTTAAGGGTATCAGGAAGAATCACTTACTGTGGTCGTGAACTATCAGAGTTTGTGCCTCAAAGAACATGTGCTTATATAAGCCAGCATGATCTTCATAATGGAGAGATGACAGTTAGAGAGACTCTGGACTTTTCGGGGCGCTGTTTGGGAGTTGGAACAAGGTATGATCTGTTGCTGGAATTGTTGAAACGAGAAAAGCAAGAAGGAATCAAACCAGACCCTGAGATAGATGCTTTTATGAAAGCCACTGCCATGGCAGGCCAAGATACAAGTCTTGTTACTGATTATATTCTCAAGATTCTTGGATTGGAAATATGTGCTGATACTTTGGTGGGAGATCAGATGAGAAGAGGCATATCTGGTGGAGAAAAGAAGCGATTAACTACTGGTGAGATGCTGGTAGGGCCTGCAAAAGCTTTCTTCATGGATGAAATCTCAAGTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAGGTTCATGAGGCAGCTAGTCCGTATAATGGATGTCACAATGATAGTCTCTCTTCTGCAGCCTGCACCTGAAACATTTGATCTATTTGATGACATAATTTTTCTCTCAGAGGGCCAGATCATCTACCAAGGCCCACGTGAGAATGTTCAGGAATTTTTCGAGAGCTTGGGATTCAAATGCCCGGAAAGAAAAGGAGTTGCCGACTTTTTACAGGAAGTAACTTCCACAAAGGACCAAGAACAATATTGGTTCAAAAGGGACAAACCTTACCAGTATGTCAGCGTGCCTGAGTTTGTAGACCACTTCAACAAGTACTACATTGGTCAGAAACTCTATGGAGAGCTTCAGATTCCTTACGACCAAAGTAAAACTCATCCGGCTGCATTGGTGAAGGAGAAGTATGGGATCTCCAGATGGGAACTCTTCAAGGCATGCTTTGCCAGAGAGTGGCTATTGATGAAGCGAAACTCGTTCATATATATATTTAAGACTACTCAGATTATGATTATGTCATTGATTGCCTTGACAGTGTTTCTTAGAACAGAAATGAAGTATGGCCATCTTGAAGATGGGGCAAAGTTCTTTGGTGCTTTGTTCTTCACTCTCGTCAATGTCATGTTCAATGGAATGGCAGAGCTTGCACTCACCATTTTTAGGCTTCCCGTTTTCTTCAAGCAGAGAGATTTCTTATTTTACCCTTCATGGTCTTTTGCACTGCCCATTTGGGTCCTGAGAATCCCTCTCTCTCTGATGGAGTCAGGAATATGGATCATCCTTACTTATTACACGATAGGGTTTGCTCCTGCTGCCAGTAGGTTTTTCCGTCAGTTTTTGGCACTCTTCTGTGTGCATCAAGCGGGTTTATCTCTTTTCCGCTTCATTGCTGCAGTTGGAAGAACAGAGATTGTGGCAAACACACTTGGTACCTTTACACTGCTGCTTGTTTTTGTCCTAGGTGGCTTCATCGTTGCCAAAGATGACATCAAACCATGGATGATATGGGGCTATTATGCTTCTCCTATGACTTATGGACAAAACGCCATAGTTATCAACGAGTTCCTTGATGAAAGATGGAGTGCACCTAATATTGATCCAAGAATCCCCGAACCCACGGTTGGGAAGGCTCTTCTCAAGGTCAGAGGCATGTTCACCGAAGAATACTGGTACTGGATCTCTGTTGGTGCTCTGCTAGGGTTTTCAATGCTTTTCAACATTTGTTTCATTGCTGCATTAACATTTTTGAGCCCATTTGGAGATTCTAAATCTATTATTGTGGAGGAGGATGACAAAAAGACATGCATGAAAGAATCAACCGCTTCTGAAAAGCAGGAGATGAAAACCTCAGAACATAGCTCAGCTTTAACTACTAACTTGTCTGAAGGCATTGATATGGTTGCAAGTAACACACAAGACAGTTCAAATCCTAAAACAGCGGAGAGGGCAAAAACTAAGAGGGGAATGGTCTTGCCTTTTCAACCTCTATCACTTGCTTTTGATCACGTGAATTACCACATTGATATGCCAGCTGAAATGAAGAAGCAAGGGATCGAAGAGAGTAGGCTTCAACTTCTAAGAGATGTTAGTGGTGCTTTTAGACCTGGAGTTTTAACTGCACTAGTTGGTGTGAGTGGTGCCGGCAAAACCACTTTGATGGATGTTCTTGCAGGAAGAAAAACTGGGGGGTATATTGAAGGAAGCATTAGCATTTCTGGTTTCCCAAAGAACCAAGCAACTTTTGCTCGGATTAGTGGTTATTGCGAACAAAATGATATCCATTCCCCAACCGTCACAGTCTATGAATCTCTTGTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTGAAGAGAGAAACACATAAGATGTTTGTTGAGGAAGTTATGAAGCTGGTCGAGCTACATCCAGTGAAGGACTTTCTAGTAGGACTTCCAGGAATTGATGGTTTATCAACTGAGCAAAGAAAGAGACTTACGATTGCTGTAGAATTGGTTGCCAATCCTTCTATAATTTTCATGGATGAGCCAACAACTGGTCTTGATGCTAGAGCTGCAGCAATTGTTATGCGTACAGTTAGAAATACTGTGGATACGGGGCGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTTGACGAGCTGCTTTTGATGAAGAGAGGAGGACAAGTCATATACAGTGGTCCCCTTGGTCAAAATTCTCAGAGCTTAATAGAGTATTTTGAAGCAATTCCATCCGTTCCAAAGATCAAAGAGGGATATAATCCTGCCACATGGATGTTGGAGATCACTTCTCCAGCAGTTGAGTCTCAGCTAGGTGTAGACTTTGCAGAATTGTACACCAAATCAGAATTATACCAGAGGAGTCAGGAACTTATTAAAGAGCAAAGCATACCAGCACCAGGAGCAAAGGACCTTTACTTCCCAACTAAATACTCCCAGCCATTCATTACTCAATGCGAAGCTTGCTTCTGGAAACAGCACTTATCCTATTGGAGGAATCCATCGTATAATGCTGTCCGGTTCTTCTTGACAATAATTGTTGGTGTCATATTTGGGCTCATTTTCTGGAAAAAAGGAGAGGAAACACAAAAGGAACAAGATCTGTTCAATCTCATGGGTGCTCTATACTCTGCTATTTTCTTCCTTGGAGCCACAAACACTTCCTCTGTCCAACCTGTTGTTGCAATAGAAAGGACGGTTTTCTACCGTGAAAGAGCAGCCGGAATGTACTCAGCTCTTCCTTATGCATTTGCTCAGGTAGCAGTAGAGATGATTTATGTAGCAATCCAAACTTTTGTGTATAGCCTTATCCTTTTCTCAATGATTGGGTTCAGCTGGCAAGCTGACAAGTTCATATGGTTCTACTACTTCATGTTCATGTGCTTTGTCTACTTCACACTTTATGGGATGATGACTGTAGCTCTCACACCAAACCACCAAATTGCTGCAATTGTTATGTCCTTCTTCCTCTCTCTCTGGAACCTCTTCACTGGTTTCATTATCCAAAGAAAGCAAATTCCAATATGGTGGGAGTGGTATTATTGGGCAAGCCCTACAGCTTGGTCTGTATATGGCCTGGTGACTTCCCAAATAGGTTACAAAAATACTCTTGTAGAGGTTCCTGGATCAACAACAATATCAGTAAAAGACTACCTTGAGAAGCAGATGGGCTTTAAATATGATTTCCTTGGAGTTGTTGCTGCTGCTCATATTGCTTTTGCTGTTCTATTTGTCTTTGTATTTGCATATGGCATCAAGTTCCTTAATTTCCAGACAAGATAA 4467 0.424 MVGMEEAMGGDNGGGVMRSVSSSLRMSIGSGSRRSWASETLRDSWTGHGGVFERSMRREDEEELKWAAIERLPTFERMRKGMMKKMQVLDCGTVDYEEVDVTKLGLHQKRHLLDSILKNAELDNEKFLQRLRNRIDRVEIEIPKIEVRFEHLFVEGDAYIGTRAQPTLVNSTMNAIEGILGSIKLFPSKKRAVKILQDVSGILKPSRMTLLLGPPGSGKTTLLKALAAKLDKDLRVSGRITYCGRELSEFVPQRTCAYISQHDLHNGEMTVRETLDFSGRCLGVGTRYDLLLELLKREKQEGIKPDPEIDAFMKATAMAGQDTSLVTDYILKILGLEICADTLVGDQMRRGISGGEKKRLTTGEMLVGPAKAFFMDEISSGLDSSTTFQIVRFMRQLVRIMDVTMIVSLLQPAPETFDLFDDIIFLSEGQIIYQGPRENVQEFFESLGFKCPERKGVADFLQEVTSTKDQEQYWFKRDKPYQYVSVPEFVDHFNKYYIGQKLYGELQIPYDQSKTHPAALVKEKYGISRWELFKACFAREWLLMKRNSFIYIFKTTQIMIMSLIALTVFLRTEMKYGHLEDGAKFFGALFFTLVNVMFNGMAELALTIFRLPVFFKQRDFLFYPSWSFALPIWVLRIPLSLMESGIWIILTYYTIGFAPAASRFFRQFLALFCVHQAGLSLFRFIAAVGRTEIVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYASPMTYGQNAIVINEFLDERWSAPNIDPRIPEPTVGKALLKVRGMFTEEYWYWISVGALLGFSMLFNICFIAALTFLSPFGDSKSIIVEEDDKKTCMKESTASEKQEMKTSEHSSALTTNLSEGIDMVASNTQDSSNPKTAERAKTKRGMVLPFQPLSLAFDHVNYHIDMPAEMKKQGIEESRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGFPKNQATFARISGYCEQNDIHSPTVTVYESLVFSAWLRLGKEVKRETHKMFVEEVMKLVELHPVKDFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGQNSQSLIEYFEAIPSVPKIKEGYNPATWMLEITSPAVESQLGVDFAELYTKSELYQRSQELIKEQSIPAPGAKDLYFPTKYSQPFITQCEACFWKQHLSYWRNPSYNAVRFFLTIIVGVIFGLIFWKKGEETQKEQDLFNLMGALYSAIFFLGATNTSSVQPVVAIERTVFYRERAAGMYSALPYAFAQVAVEMIYVAIQTFVYSLILFSMIGFSWQADKFIWFYYFMFMCFVYFTLYGMMTVALTPNHQIAAIVMSFFLSLWNLFTGFIIQRKQIPIWWEWYYWASPTAWSVYGLVTSQIGYKNTLVEVPGSTTISVKDYLEKQMGFKYDFLGVVAAAHIAFAVLFVFVFAYGIKFLNFQTR 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0246 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1126 IPR027417 -
Dere01g0246 1488 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 32 1488 - -
Dere01g0246 1488 SMART AAA_5 205 430 IPR003593 GO:0016887
Dere01g0246 1488 SMART AAA_5 924 1116 IPR003593 GO:0016887
Dere01g0246 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 887 1140 IPR003439 GO:0005524
Dere01g0246 1488 CDD ABCG_PDR_domain2 884 1122 IPR034003 -
Dere01g0246 1488 Pfam ABC-transporter N-terminal 121 170 IPR029481 -
Dere01g0246 1488 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 180 453 IPR003439 GO:0005524
Dere01g0246 1488 Coils Coil 128 148 - -
Dere01g0246 1488 Pfam ABC-2 type transporter 532 744 IPR013525 GO:0016020|GO:0140359
Dere01g0246 1488 Pfam ABC-2 type transporter 1212 1425 IPR013525 GO:0016020|GO:0140359
Dere01g0246 1488 Gene3D - 901 1136 IPR027417 -
Dere01g0246 1488 Pfam Plant PDR ABC transporter associated 757 815 IPR013581 -
Dere01g0246 1488 FunFam ABC transporter G family member 40 901 1131 - -
Dere01g0246 1488 Pfam ABC-2 type transporter 1096 1163 IPR043926 GO:0140359
Dere01g0246 1488 Pfam ABC-2 type transporter 411 463 IPR043926 GO:0140359
Dere01g0246 1488 Pfam ABC transporter 915 1066 IPR003439 GO:0005524
Dere01g0246 1488 FunFam ABC transporter G family member 34 183 487 - -
Dere01g0246 1488 Gene3D - 182 486 IPR027417 -
Dere01g0246 1488 Pfam ABC transporter 196 378 IPR003439 GO:0005524
Dere01g0246 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 453 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0246 Dere-ChrDere01 6801461 6814399 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0246 912 1099 Calmodulin-binding Proteins AT2G36910 27.094 5.64e-07 52.8