Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0221 ATGAAAGTCAAGATTGTTTTGCTTGACTCAGTTTTCTATCTGGATTTCCCCTGGGCTTCTGAAAAGAAACTTATTACTTTGTTAATTCTCAGATATCCTAGGCATATTCAACTGTTGTTGACTTTCCTTTCTTTAAATGCTCACATTCTTGCCCATTGTGTTGATTATAGATGGCATGGTGTTGCGTCATGGACTTGGGATGCTCAGGATGAAACATGTGGGATTTGTAGGATGGCCTTTGATGGATGTTGCCCTGACTGTAAACATCCTGGGGATGACTGTCCTTTGATTTGGGGTGCATGCAATCATGCTTTTCATTTGCACTGTATCCTGAAATGGGTGAATTCTCAGACTTCACAAGCTCATTGCCCAATGTGCCGTCGGGAATGGCAGTTTAAAGGATGA 405 0.4173 MKVKIVLLDSVFYLDFPWASEKKLITLLILRYPRHIQLLLTFLSLNAHILAHCVDYRWHGVASWTWDAQDETCGICRMAFDGCCPDCKHPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0221 134 SUPERFAMILY RING/U-box 57 133 - -
Dere01g0221 134 CDD RING-H2_APC11 70 132 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Dere01g0221 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 134 IPR013083 -
Dere01g0221 134 PANTHER RING BOX 57 133 - -
Dere01g0221 134 ProSiteProfiles Zinc finger RING-type profile. 84 127 IPR001841 -
Dere01g0221 134 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 57 133 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Dere01g0221 134 FunFam Anaphase-promoting complex subunit 11 50 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0221 Dere-ChrDere01 6054641 6058563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0221 84 127 C3H Transcription Factor Family AT1G72220 41.304 2.30e-06 43.5