Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0167 ATGGGCAAGAAGTCTCTCAGCCTCCCATCTCTCTTCGGAAAGCATCCATGGCAGCTCTTACCTTCTTGTGGTTTCTCGCCGAAGACCCTCTCCTTCCGCGCCGGCGACGACATATTTAGGACGGTGAACTCTGTCTTCTTCGACCCGATCGAGACCGCCGCCGGCGCTGTTGAGACGCCCGACCCGTGGTTCACGACCTCGTCGGAATCTGCGGCGAGCTTCACGACCGAGTCCGACGTCGACGGGGATGGCGAGTCGCTGGAGATGGTGGTGCGCGGCGTGAGGTCGTCGTCGACGGAGTCGGAGAGGCTGTTCTTTGATCCGGACGACACGAGGTCGATCTTGGAGAAGGCGAAGGCGAGCATCGGGTTTCCGTTCAAGGAGAGCGAGGTTCTGGCTATGGAGTCGGAGGATCCGTACGGCGATTTCAGGAGATCGATGGAGGAGATGGTGGAGTCGCACGGGGTTAAGGATTGGGAGGGATTGGAGGAATTGCTGGGTTGGTACTTGAAGGTGAACGGGAAGAACAATCATGGATTTATCGTGGGGGCTTTTGTGGATTTACTCGTGAGTTTACAGAACAATCCCATTTCTCGTTCAGATTCTTCTTCTTCTACCTCTTATTCTTCTGCTGTTTCTTCTTTCTCGTCGTCTTCTTCGTTGTGCGTATTTCATTCTCAGCGTCAGAGTGAGATTGTTGGTGACGCTGATGGGGAGCATGAAGGAAATACAGTAACATCTTAG 744 0.5417 MGKKSLSLPSLFGKHPWQLLPSCGFSPKTLSFRAGDDIFRTVNSVFFDPIETAAGAVETPDPWFTTSSESAASFTTESDVDGDGESLEMVVRGVRSSSTESERLFFDPDDTRSILEKAKASIGFPFKESEVLAMESEDPYGDFRRSMEEMVESHGVKDWEGLEELLGWYLKVNGKNNHGFIVGAFVDLLVSLQNNPISRSDSSSSTSYSSAVSSFSSSSSLCVFHSQRQSEIVGDADGEHEGNTVTS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0167 247 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Dere01g0167 247 NCBIfam uncharacterized plant-specific domain TIGR01568 133 193 IPR006458 -
Dere01g0167 247 MobiDBLite consensus disorder prediction 59 81 - -
Dere01g0167 247 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 77 192 IPR038933 GO:0045892
Dere01g0167 247 MobiDBLite consensus disorder prediction 61 80 - -
Dere01g0167 247 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0167 Dere-ChrDere01 5387334 5388077 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere01g0167 Ovate 3e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2644 01 41279984 41281975 Dere01g0167 01 5387334 5388077 ECH
Dere02g1229 02 11788549 11789274 Dere01g0167 01 5387334 5388077 ECH
Dere01g0167 01 5387334 5388077 Dere01g0167 01 5387334 5388077 ECH