LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere01g0165	ATGGGAATGGCAATGGTGGGTGTTGATCCACTCAGTGAAAAAGCTGCCGTGATGAGAGAGTCGCTTCAGAAGAGCCAGACTATCACAGACAAGGTAGTTACAATTCTGGGCTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCAACCCAGATTAGAACGCATTCTATACGGAAAGCTCATGAGAATATTGATAGGACCTTGAAGGCTGCGGAAGTCATACTGGCTCACTTTGATCAATGTCGTCAGGCAGAGACAAAAATACTTAGAGGGCCACATGAAAACTTGGAGAACTATCTTGAAGCAATTGATAAGCTGAGAAGCGACATTCAGTTTTTTGGAAGTAAAAAGGGCTTTAAGAGTGGTGATGGTGTTGTCACCCATGCCAATGATTTGCTGGCTAAAGCCATTTCTAAACTAGAAGATGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCTGTGGAACCTGATCGCCTCTTTGATTGCCTTCCCAACTCAATGCGACCTTCCTCTGGATCACCTGGACGTGAGGGTGATTCTAGTGGCAAGAATCCTTCTTCCAATAATCCGTCTGACCCACAAACTGATGCTGTTGTCTATACACCTCCTGCTCTCATACCACCAAGGGTTTTGCCACTACTCCATGATCTAACCCTGCAAATGGTACAAGCTGGCCACCAAAATCAGTTACTCAAAATTTACAGGGATACCCGTTCTAGTGTATTAGAAGAAAGCCTTCTTAAACTGGGAGTTGAGAAACTCAGCAAGGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAGGCCAAAATTGGAAACTGGATTCATTACATGCGTATAGCTGTCAAATTATTGTTTGCTGGTGAGCGGAAAGTTTGTGATCAAATCTTTGAAGGCTTCGATTCACTTAGTGATCAATGTTTTGCTGAAGTGACAACAAGCAGTGTCTCTATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAAAGATCACCAGAAAAGTTATTTGTGCTTTTGGACATGTATGAAATAATGCAAGAGCTCAATTCAGAGATCAAAGCACTCTTTAAAGGCAAAGCTTGCACTGAAATAAAAGAAGCTGCACTGGGTTTGACAAAACAGCTTGCTCAAACTGCTCAGGAGACCTTTGGGGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAAACTGCTGTTACAGATGGAACTGTCCATCCTTTGACAAGCTACGTAATTAACTATGTGAAGTTTTTATTTGACTACCGCTCCACCTTGAAGCAACTTTTTCTAGAATTTGAAGGTGGAGATGATGCTTCACAACTGGGGTCTGTAACAATGAAAATAATGCAAGCTCTGCAAAACAATTTAGAAGGAAAATCAAAGCAGTATAGAGAGCCTGCTTTGACACATCTATTTCTCATGAATAATATTCATTATATCGTCAGATCAGTACGGAGGTCTGAAGCCAAGGATTTATTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGAATGCAAATCAGTACAAAAGAATTGCCTGGGCTAAGATTCTTCAGTGCCTCTCTATTTCAGGTCTTACTTCATCTGGTGGAGGTGGTAGCACAGGAGGTGGAGATGGGGGAAGTAGTGGAGCTTCAAGAGCAATTGTTAAAGAAAGGTTTAAAACATTCAATGTTATGTTTGAGGAGCTTCATCAGAAACAATCTCAATGGGCCGTTCCTGATACAGAGTTACGAGAGTCTCTTAGGCTCGCAGTTGCTGAAGTCTTGCTGCCTGCGTATAGGTCATTTGTGAAACGTTTTGCGCCTTTAGTGGAGAATGGAAAGAATCCTCAGAAGTACATAAAATACACAGCTGAAGATCTTGAGCGAATGTTGGGTGAATTTTTTGAAGGAAAAAGCGTGAACGAAATGAGGCGGTAA	1947	0.4222	MGMAMVGVDPLSEKAAVMRESLQKSQTITDKVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQCRQAETKILRGPHENLENYLEAIDKLRSDIQFFGSKKGFKSGDGVVTHANDLLAKAISKLEDEFKQLLSSYSKPVEPDRLFDCLPNSMRPSSGSPGREGDSSGKNPSSNNPSDPQTDAVVYTPPALIPPRVLPLLHDLTLQMVQAGHQNQLLKIYRDTRSSVLEESLLKLGVEKLSKDDVQKLQWEVLEAKIGNWIHYMRIAVKLLFAGERKVCDQIFEGFDSLSDQCFAEVTTSSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELNSEIKALFKGKACTEIKEAALGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFLEFEGGDDASQLGSVTMKIMQALQNNLEGKSKQYREPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQNANQYKRIAWAKILQCLSISGLTSSGGGGSTGGGDGGSSGASRAIVKERFKTFNVMFEELHQKQSQWAVPDTELRESLRLAVAEVLLPAYRSFVKRFAPLVENGKNPQKYIKYTAEDLERMLGEFFEGKSVNEMRR	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere01g0165	648	MobiDBLite	consensus disorder prediction	162	203	-	-
	Dere01g0165	648	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	58	640	IPR004140	GO:0000145\|GO:0006887
	Dere01g0165	648	MobiDBLite	consensus disorder prediction	170	200	-	-
	Dere01g0165	648	Pfam	Exo70 exocyst complex subunit	277	635	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Dere01g0165	648	Gene3D	Exocyst complex component Exo70	75	648	-	-
	Dere01g0165	648	SUPERFAMILY	Cullin repeat-like	77	639	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere01g0165	Dere-ChrDere01	5342694	5356191	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere01g0165	8	648	EXO70 exocyst subunit family	AT5G03540	75.749	0.0	990