Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0149 ATGCCGGGCATACCTGTTGTGGCTCGCGAAACCTCCTGTTCTAGAAGCACTGATCAAATGTGCCGTCTAGATTCTCGAGTGCATTTATCTGTGGAGGAGGAGCTTGCTGCAGAAGAGAGTCTTGCAATTTATTGCAAGCCCGTAGAGCTCTACAACATTATTCAGCGACGTGCTATAAATAATCCAACATTTCTGCAGAGATGTTTGCACTACAGGATAAAGGCTAAGCACAAAAGGAGAATACAAATGACAATTTCGCTGTCACAAACTGCGAATGAAACCCAGACTGTCTTTCCTTTGTATATCTTTCTGGCAAGACTGGTTTCTGATGTTGGAGTTGCAGAGTATTCTGCTACCTATCATATCAGTCGGCTTTGCATGTTCCGCAATTGCTCTGGAATTGATGGTAATTCTCAAGTCCAAGCAAACTTTACGCTCCCTGAAGTTAATAAGCTAGCTGCAGAGGCTAGATCTCGCTCACTTGCTATTTTGTTTGTCAGCTCTGTGGAAAACTTGAATTCAGCTAATGGAGTCAATCCAAGCATGGCTTTGGATCTAACTTCTTTTCCATCAACAGATGGAGGATACTGCTTATATGGAAAAGTATCTTTAGAATCACTTTATATGACTTGGGAGAGTTCTCCAAATTTTAGTCTGGGACAGCGAGCTGAGATCATGTCAACTGTTGATTTGCTTCCTTGTTTTCTGAAGTCAGATTTTTTTAATGAAGATAAGCGTGTCTCCATTCAAGTTCCCTGTAATTCTGAAAATATGTGTACATCAAAGCAAGTACAAATCACAATTTCTGCCGAAGAGTTTGGGGCCAAGGAAAAATCTTCCTACCACACATATGCAGGCAGCGAAGTACCATCCTCATCATTATCTCATATTATTCGGTTGAGGGAAGGAAATGTCATATTTAATTACAGGTATTACAATAATAAGTTGCAGAGAACAGAAGTCACTGAAGATTTTTCCTGTCCGTTCTGTTTGGTTAAATGTGCCAGCTTTAAGGGTCTTAAATATCACCTGCCGTCATCACATGATCTCTTCAACTTCGAATTTTGGCTATCAGATGAAGTTCAGGCTGTAAATGTGTCTGTGAAACATGATATCTGGAGACCTGAGCTTATTGCTGAGGGTGTTGATCCGAAAGTACAAACATTCTTCTTCTGTGCGAAGCCACTTAAACGCAGAAGACCAAAGAACCTAGCTTTTAAGAATGCAAAGCATGTGCAGCCACTTGTTTTAGAGTCTGACTTTCCTGTAGAAGATACTGAGCTTTTGGAGAGGGCTGATGGGGTTTTTAGTGCAATGAGGCAATCACATCCAGACCCAGACTATGTCCAATCAATATCTGAAAATAATCTTGGGACTTCTGCAGTGCTACAATTTGCAAAGACTAGAAAGTTATCTGTTGAGCTTTCTGACCCACGAAATTGTGCCCTCCTGAGGAAGCGCCAGTTTTTTCACTCTCACAGAGCCCAGCCAATGGCACTTGAACAAGTTCTGTCAGATCAAGATAGTGAAGATGAAGTTGACGATGATGTTGCAGATTTTGAAGATCGAAGGATGCTTGATAATTTTGTTGATGTAACAAAAGATGAGAAGCAAATCATGCATATGTGGAACTCATTTGTTCGGAAGCAGCGTGTTCTGGCTGATGGCCACATTCCTTGGGCATGTGAGGCTTTCTCAAAATTGCATGGCCCTGAGCTTGTCCGATCCCCTGCATTAACTTGGTGTTGGAGATTGTTTATGATCAAACTGTGGAATCATGGTCTCCTAGATGCACGTACCATGAATGACTGTAGCATTATTCTTGAACAATGTCAGAAGCAGAATTCAGATCCTAAAAGCTAA 1863 0.4138 MPGIPVVARETSCSRSTDQMCRLDSRVHLSVEEELAAEESLAIYCKPVELYNIIQRRAINNPTFLQRCLHYRIKAKHKRRIQMTISLSQTANETQTVFPLYIFLARLVSDVGVAEYSATYHISRLCMFRNCSGIDGNSQVQANFTLPEVNKLAAEARSRSLAILFVSSVENLNSANGVNPSMALDLTSFPSTDGGYCLYGKVSLESLYMTWESSPNFSLGQRAEIMSTVDLLPCFLKSDFFNEDKRVSIQVPCNSENMCTSKQVQITISAEEFGAKEKSSYHTYAGSEVPSSSLSHIIRLREGNVIFNYRYYNNKLQRTEVTEDFSCPFCLVKCASFKGLKYHLPSSHDLFNFEFWLSDEVQAVNVSVKHDIWRPELIAEGVDPKVQTFFFCAKPLKRRRPKNLAFKNAKHVQPLVLESDFPVEDTELLERADGVFSAMRQSHPDPDYVQSISENNLGTSAVLQFAKTRKLSVELSDPRNCALLRKRQFFHSHRAQPMALEQVLSDQDSEDEVDDDVADFEDRRMLDNFVDVTKDEKQIMHMWNSFVRKQRVLADGHIPWACEAFSKLHGPELVRSPALTWCWRLFMIKLWNHGLLDARTMNDCSIILEQCQKQNSDPKS 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0149 620 Pfam VEFS-Box of polycomb protein 471 606 IPR019135 -
Dere01g0149 620 PANTHER POLYCOMB GROUP PROTEIN 28 619 - -
Dere01g0149 620 CDD ZnB-Zn_EMF2-like 294 373 - -
Dere01g0149 620 CDD VEFS-box_EMF2-like 484 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0149 Dere-ChrDere01 4995523 5037908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0149 1 612 C2H2 Transcription Factor Family AT5G51230 60.998 0.0 716