Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0137 ATGGTGGGAAAGGAGGATGCTCGAGCTCCGGGCCAGCTTACCGGCTCCCCGAAAATGTTCTGGCGGTCGGCTTCTTGGTCGTCATCCCGTTCCTCCCCCCTCAACCGCGACGGCGAAGAGAAGGATTTTGCAGATCCAGATGGCAATATTGGAAATTTTAACGGGCAAAATCGTAGGTATCCTCCCGTTCCATTAACTCCTCGATCGCAGCAGAATTCTAAGGCTAGGTCGTGTTTGCCGCCGTTGCAACCGCTGTCGATTGCTAGGAGGAGCTTGGATGAGTGGCCGAAGGCGAGTTCGGATGATATTGGCGAGTGGCCACAACCCCCAACCCCTAGCGGAAGAGGAAACGGGGAGAGGTTGAAGCTTGATTTGTCTTCGATTCAGCGAAACCCAGATAAAAATGGTGGACTTGTGAAGAGAGATAAGATTGCTTTCTTTGACAAAGAATGCTCGAAAGTGGCCCAACATATTTATCTCGGTGGGGATGCGGTTGCTAGAGATAGGGATATATTGAAACAGAATGGGATTACCCATATCCTGAACTGTGTGGGTTTTGTTTGTCCAGAGTACTTCAAAGCCGATTTTGTATATAGAACGCTCTGGTTGCAGGATAATCCATCAGAAGATATTACTAGTATCCTGTATGATGTCTTTGACTATTTTGAAGATGTTAGGGAGCAAGGAGGAAGGGTGTTTGTGCACTGCTGCCAAGGGGTGTCTCGGTCCACATCTCTGGTGATTGCATATCTTATGTGGAGAGAAGGGCAAAGTTTTGATGATGCTTTTCAGTATGTCAAAGCGGCAAGAGGTATTGCTGATCCTAATATGGGCTTTGCCTGCCAATTGTTGCAATGCCAAAAAAGGGTGCATGCATTCCCGCTTAGCCCAAGCTCTTTACTGAGATTGTATAGGATGGCCCCACACTCACCATACGATCCTCTGCATCTTGTCCCCAAAATGTTGGCTGATCCTTCTCCATCAGCTCTGGACTCAAGAGGTGCATTTATAGTGCATATACCTTCTGCAATATATGTTTGGATAGGTAAGAATTGTGAGGCCATCATGGAAAGGGATGCCAGAGGGGCTGTGGGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTCCAATTGTAATGATCAAGGAAGGTGAAGAACCTGCTTACTTTTGGGAGGCTTTTTCGAAATATTTGCCTTTGATGGACAAGTCTGGCAAGCAAACTGAACCTATCAAATCAAGTGTTAAGATTTGTCCTGGTGAGCGGAAAGTTGGCTCATATGATGTTGATTTTGAAGTTTTCCAGAAAGCCATCATGGGGGGTTTTGTGCCTCCATTTGCATCATCAGAAGATGAACATGAAACCCATCTTCCTGCCAGAGAGAGCAGTTGGAGTGTTTTAAGGCGTAAATTTGCCTCTGCTAATATGAAGGAATTTGTAACAGTGCCTAAGTTATCCTTTTCAAGGGTTTATTCAGATTCCATTTTGTGTAATTATTCATCAGCAAATTCATCTCCATCCTCATCACAGTCATCATCTTTGTTATCTACATCTTCTTCACCCGCTTTTCTATCTCCAGATTCCATTTCATCTGATTCAATTACTAATTCAAAGTATTTGTCAGAATCGTCCCTGGATTCCCCTTTTGCAGCTTCTACTTATGTTCCAGTATCTTCGTCTTTGTCTAACTTTTCTAACCTGTCCCTCTCATCCAATTGCTCTTCTCATACAGTATCTAACGGTGCAGAAGTTCCTGGTGTTAAGTTGACATCAGAGCCTTGTTCTCGGTCAACCTCTTCAACATTGAAAAAACCTTTAACTTCCCTCGCTGAGCGTAGAGGTAGCTTATCCAAGTCTTTGAAATTACCCCTAACAAATGATAAGAAACAGGTCATAAATAGACCATCAACATTTCCTTCGATTCGAGAAGATGGTCTTGTGGTGAACTGCAAGCATGATGAAGTTAGTTGGGTGAATTCAATTCAGCAGTGTAAGGTGCCATGTTCAATTGCTGTGGATAGTGTGGACTACGAGGAAGCTTCATTCGTCAGAAAATGTGGTGAATCTTCCGTATGTGGTTCCTCCAGAGAAGACACAAATTCTACTTCATCAGACGAGATTGATGATGGTATATCACAATGTAATAGGACACAAACTTTAGTATATCACTGGCCCAGTTTAGAGAAGATTACAACATTTGGTGAAAGTCATCTAGATTCCCAATCTGCTTTTGTTATTTTCTCTCCATGTACCGGATTAGATGAACATACAGGGAATGTTTTATACTTTTGGACTGGGAGGTCTTTCAACTGCGATGCATCGCAGGTTTGGTTAGATAGTGATAGAGGGACAGATTATCCAAGACCAGTTGACTGGAACCAAATTGGATGCTATGTCCTTGGTCAATTCAGTTTGCCAAAAGACACAACCATCATGATTGTTAGAGAGAATGAAGAACCAGATGATTTCCTTGCTTTACTGAGTACATTGTGGCTAAAGAACTAA 2502 0.4337 MVGKEDARAPGQLTGSPKMFWRSASWSSSRSSPLNRDGEEKDFADPDGNIGNFNGQNRRYPPVPLTPRSQQNSKARSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPTPSGRGNGERLKLDLSSIQRNPDKNGGLVKRDKIAFFDKECSKVAQHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDNPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRLYRMAPHSPYDPLHLVPKMLADPSPSALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAVGQIVRYEKVQGPIVMIKEGEEPAYFWEAFSKYLPLMDKSGKQTEPIKSSVKICPGERKVGSYDVDFEVFQKAIMGGFVPPFASSEDEHETHLPARESSWSVLRRKFASANMKEFVTVPKLSFSRVYSDSILCNYSSANSSPSSSQSSSLLSTSSSPAFLSPDSISSDSITNSKYLSESSLDSPFAASTYVPVSSSLSNFSNLSLSSNCSSHTVSNGAEVPGVKLTSEPCSRSTSSTLKKPLTSLAERRGSLSKSLKLPLTNDKKQVINRPSTFPSIREDGLVVNCKHDEVSWVNSIQQCKVPCSIAVDSVDYEEASFVRKCGESSVCGSSREDTNSTSSDEIDDGISQCNRTQTLVYHWPSLEKITTFGESHLDSQSAFVIFSPCTGLDEHTGNVLYFWTGRSFNCDASQVWLDSDRGTDYPRPVDWNQIGCYVLGQFSLPKDTTIMIVRENEEPDDFLALLSTLWLKN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0137 833 ProSitePatterns Tyrosine specific protein phosphatases active site. 234 244 IPR016130 GO:0016311|GO:0016791
Dere01g0137 833 SUPERFAMILY Actin depolymerizing proteins 297 399 - -
Dere01g0137 833 Gene3D Protein tyrosine phosphatase superfamily 138 292 IPR029021 -
Dere01g0137 833 MobiDBLite consensus disorder prediction 1 120 - -
Dere01g0137 833 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 145 291 IPR029021 -
Dere01g0137 833 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 209 270 IPR000387 GO:0016311|GO:0016791
Dere01g0137 833 MobiDBLite consensus disorder prediction 63 79 - -
Dere01g0137 833 SMART dsp_5 150 289 IPR020422 GO:0006470|GO:0008138
Dere01g0137 833 PANTHER MKPA PROTEIN 17 826 - -
Dere01g0137 833 CDD DSP 151 285 - -
Dere01g0137 833 ProSiteProfiles Dual specificity protein phosphatase domain profile. 150 292 IPR020422 GO:0006470|GO:0008138
Dere01g0137 833 Gene3D Severin 302 397 IPR029006 -
Dere01g0137 833 Pfam Dual specificity phosphatase, catalytic domain 158 288 IPR000340 GO:0008138|GO:0016311
Dere01g0137 833 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0137 Dere-ChrDere01 4820785 4825163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0137 1 186 Protein tyrosine phosphatase (PTP) family AT3G55270 66.489 1.74e-72 251