Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere01g0133 | ATGATGAAGAGGGAAAGATCAGATCAGCATCAGGTTGATCATCACAGAATAGCCATGGCCAACTGCTTGATGCTGCTTTCTGAGGCAGCTTCCTACGACTCTAACAGCGGATCTTCTCCTTCTTCTTCCGGCGGCCGTGTGTTCGAGTGTAAGACCTGCAACCGCCACTTCTCGTCGTTCCAGGCGCTCGGCGGCCACCGGGCGAGCCACAAGAAGCCGAGGATGATGATGGGGGGAGGAGAACATAATAACAATAGCAATAGTAACAGTGATGATGGTCTTCATGGTTCATCACCTGCAAAGCCTAAGACTCATGAGTGCTCAGTCTGTGGATTGGAGTTTGCAATAGGGCAGGCTTTGGGGGGTCACATGAGGAGGCACAGAGCACCAATATCAGTATCTTCCAATAACAATGATGGTAATTGTGTGGCTATGAGTAGCAGTAGTGGAAGTGGAAGCTCTGGGGCTGAGTGTGATTCTTCAGGTACAGAGAAGAAGATGAAGAAGGGCAAGAGGGTTTTGTTTTTGGATTTGAACTTGACACCCTTTGAGAATGACTTGGAGTTTCTGGGGATTGGGATTGGAAAGCCAAGTAGCACTTCTTTGGTGGATTGCTTCTATTGA | 624 | 0.4856 | MMKRERSDQHQVDHHRIAMANCLMLLSEAASYDSNSGSSPSSSGGRVFECKTCNRHFSSFQALGGHRASHKKPRMMMGGGEHNNNSNSNSDDGLHGSSPAKPKTHECSVCGLEFAIGQALGGHMRRHRAPISVSSNNNDGNCVAMSSSSGSGSSGAECDSSGTEKKMKKGKRVLFLDLNLTPFENDLEFLGIGIGKPSSTSLVDCFY | 207 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere01g0133 | 207 | SMART | c2h2final6 | 105 | 127 | IPR013087 | - | |
Dere01g0133 | 207 | SMART | c2h2final6 | 48 | 70 | IPR013087 | - | |
Dere01g0133 | 207 | MobiDBLite | consensus disorder prediction | 63 | 100 | - | - | |
Dere01g0133 | 207 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 107 | 127 | IPR013087 | - | |
Dere01g0133 | 207 | MobiDBLite | consensus disorder prediction | 142 | 163 | - | - | |
Dere01g0133 | 207 | MobiDBLite | consensus disorder prediction | 80 | 95 | - | - | |
Dere01g0133 | 207 | Pfam | C2H2-type zinc finger | 105 | 130 | - | - | |
Dere01g0133 | 207 | Pfam | C2H2-type zinc finger | 47 | 73 | - | - | |
Dere01g0133 | 207 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 50 | 70 | IPR013087 | - | |
Dere01g0133 | 207 | Gene3D | Classic Zinc Finger | 25 | 128 | - | - | |
Dere01g0133 | 207 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 48 | 75 | IPR013087 | - | |
Dere01g0133 | 207 | MobiDBLite | consensus disorder prediction | 142 | 160 | - | - | |
Dere01g0133 | 207 | SUPERFAMILY | beta-beta-alpha zinc fingers | 46 | 127 | IPR036236 | - | |
Dere01g0133 | 207 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 105 | 127 | IPR013087 | - | |
Dere01g0133 | 207 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 2 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere01g0133 | Dere-ChrDere01 | 4771323 | 4771946 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere01g0133 | 2 | 190 | C2H2 Transcription Factor Family | AT2G37430 | 40.526 | 7.35e-37 | 125 |