Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0132 ATGTCTATGGGTTCCTTGGCTCAAATCCTCAAATGGGCATCGCCTTATTTGGCTGCAATTTTGTTACAGTTTGGGAATGCAGGCATGGCCATCATATGCACATTTGCTCTTGACCAAGGCTTGAGCCAGTACGTGCTAGTAGTATATCGCCATGCTCTTGCCTTTCTCATTGTCTCTCCTTTTGCTCTTTTCTACGATAGGAATCCAAGACCTAAACTGACATTCTCTGTGTTAGTTAAGATTATGCTGCTTGCATTAATAGAACCCGTCATAGATCAGAACTTGTACTATACTGGGATGAAGTACACTTCTGCAACATACACTTCTGCTTTGGCTAATGTTCTTCCTGCTTTTGCATTTATATTGGCTTGGGCTTTAAATCTTGAGAAGGTGAATGTGAGGAAGGTGCATAGCCAGGCGAAGATAGTGGGAACTGCAGTAACTGTAGGAGGAGCAATGGTGATGACTGTGGTTAAAGGGTCAATGTTGAATTTGCCATGGACAAAAGGAGTCACTCAGGAAGATTCAGAAAGTGCTTCAGATAATCATAATCTCATTTATGGTGCTCTAATGATAGCAACAGGCTGTGTCTGCTGGTCGGCTTTCGTCACTCTTCAAGCTGTCACACTGAAATCCTACCCAGCTGAGCTCTCCCTCACAGCTTGGATATGCCTGATGGGTGCAGTGGAAGGCACTGTTCTTGCACTTGTAATTGAATGGCATAATCCTTCAGCCTGGTCCATCCACATGGACTCTAAATTATTAGCTGTTGTGTACAGTGGAGTGATTTGCTCTGGGGTTGCTTACTATGTTCAAGGACTGATAGTGAGGGCAAAAGGGCCTGTTTTTGTGAGTGCTTTCAATCCCCTAAGCATGATCATTGTAGCAATCATGGCATCTATTGTTCTAGCTGAAAAAATCTACATTGGAAGGGTTTTTGGAGCGATTGTAATAGTGATTGGAATATACATGGTTTTGTGGGGAAAAAGCAAAGATTCAGACGAAGTAGAATCATCTTCACCAAATGGCTCCAATTGCTCAGAGAGCAAAGAATCTGCAATGAATGGCTATGTCTGA 1077 0.429 MSMGSLAQILKWASPYLAAILLQFGNAGMAIICTFALDQGLSQYVLVVYRHALAFLIVSPFALFYDRNPRPKLTFSVLVKIMLLALIEPVIDQNLYYTGMKYTSATYTSALANVLPAFAFILAWALNLEKVNVRKVHSQAKIVGTAVTVGGAMVMTVVKGSMLNLPWTKGVTQEDSESASDNHNLIYGALMIATGCVCWSAFVTLQAVTLKSYPAELSLTAWICLMGAVEGTVLALVIEWHNPSAWSIHMDSKLLAVVYSGVICSGVAYYVQGLIVRAKGPVFVSAFNPLSMIIVAIMASIVLAEKIYIGRVFGAIVIVIGIYMVLWGKSKDSDEVESSSPNGSNCSESKESAMNGYV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0132 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Dere01g0132 358 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Dere01g0132 358 Pfam EamA-like transporter family 15 138 IPR000620 GO:0016020
Dere01g0132 358 MobiDBLite consensus disorder prediction 334 358 - -
Dere01g0132 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Dere01g0132 358 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
Dere01g0132 358 MobiDBLite consensus disorder prediction 337 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0132 Dere-ChrDere01 4765630 4767988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0132 10 351 Nodulin-like Gene Family AT2G39510 60.350 2.75e-155 439