Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0119 ATGCCCTCGCTTTTCGCTTGCTCAACTTCGAAAATCTACCAACAACTTTCACTCAAGTCAACTACTTCGAAGAGGACCCTTTGCAAAATAATGATGGTGTATGAGTGCATGCCAAATGGATCCCTCAGGCATCAACTAGATCCAAGGGATGGTAAGTCGCCAATACTCTCATGGAAGAGAAGGTTAGAAATAAGCATAGGGGCTGCGCGTGGATTACACTACCTTCACTCACGAACCAAGCGCACCATCTTCCACCGTGATGTCACAACGAACGACATTCTTTTGGATGAGAATTGTGTTCCCAAGATCACAGGTTTTGGTCTTACCGTAAAGGGACCAAAATTTTCATCCAAGGCCCTAGAACCCATTGAGTTGGATACTATTGTACGTACTAATACACATATGGCTCCTGAGTATGCTCGGCATGGTAAGTTCACAGACAAGTCTGACGTCTATTCTTTTGTAGTGGTTTTGTTAGAATTGGTATGCGAAAAAATGTTCTACCAAACTTTGAGGGAGATTTTTCTTAAGGGGAGTGAGGATGACTACGTGAATGTGAATGGAGGGGGGGGGGGGGGGGGACATACTTTGCCATCATTTTGGGATATAGTTCGAAAGAAGAATGCTGAAAAAATTATTGATCCATGTTTGGTAGGAGAAATAACGCCAGAGTGCTGGAAATTGTACATTCATATTGTAGAGATTTGCTTAAATGAAGATGCTAGTGAAAGGCCAGCCATGGGCGAAGTGGAGGTGGAACTTGAACGAGCGTTGGAACTTCAAGAGGAAGCCAGCGACAACCACCAATTTCATGCAATTTCTCTCTGTTAG 831 0.4368 MPSLFACSTSKIYQQLSLKSTTSKRTLCKIMMVYECMPNGSLRHQLDPRDGKSPILSWKRRLEISIGAARGLHYLHSRTKRTIFHRDVTTNDILLDENCVPKITGFGLTVKGPKFSSKALEPIELDTIVRTNTHMAPEYARHGKFTDKSDVYSFVVVLLELVCEKMFYQTLREIFLKGSEDDYVNVNGGGGGGGHTLPSFWDIVRKKNAEKIIDPCLVGEITPECWKLYIHIVEICLNEDASERPAMGEVEVELERALELQEEASDNHQFHAISLC 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0119 276 Gene3D Transferase(Phosphotransferase) domain 1 37 274 - -
Dere01g0119 276 Pfam Protein tyrosine and serine/threonine kinase 29 251 IPR001245 GO:0004672|GO:0006468
Dere01g0119 276 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0119 276 Coils Coil 247 267 - -
Dere01g0119 276 PIRSF ILK 21 273 - -
Dere01g0119 276 SUPERFAMILY Protein kinase-like (PK-like) 25 253 IPR011009 -
Dere01g0119 276 PANTHER OS07G0166700 PROTEIN 29 261 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0119 Dere-ChrDere01 4623770 4624784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0119 28 267 Receptor kinase-like Gene Family AT3G51550 40.164 5.38e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0119 PK_Tyr_Ser-Thr 4.3e-24 CL0016