Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0118 ATGGACATGGAAGTTTCTTCGGCTTTAAGCATTGCCAAAGAAGAAAGAGAGAAAAAACTGGGAAAGACAGACACTGAAGCTGATCTTCATTGCAGTTTGCTGCAACATTGCAATATCACTCACATGGAGATCATTCCCAAATGCTTCGATGGCTTTGCTTCTTCTTCCACTAAACAACCTCCCACAACAATACAAGAGCTATGCCATCGCTTTTCGCTCGCCCAACTTCGAAAAGCTACCAACAACTTCGACACAAATCAACTCATCGGAAGAGCACCCTTTGGGGAGACATACAGAGGTTGCATCTCCATCCATGACGAACCAACACAAATTGCAGTGAAGCGGCTACGAGCAGGAGGATCCTCACCAGGGCTCTCTATGTACAAGAATGAAATCCTCTTCATGTGCCAGCTTCGCCATCCAAATTTGGTGTCTCTTATCGGATTTTGTGACGATAAGAAAGAATTGATGGCGGTGTACGAATACTTGCCCAATGGGTCCCTCAAAAATCAACATGATCGAAGTGGAAGTCATAGTAGGTCACCAGTACTGTCATGGAAGAAACGACTAGAAATCAGCATAGGAGTGGGGCGGGGATTACACTACCTTCACGCAGGAACCAAGCGCACCATCTTTCACCGTGATGTGAAAACCACTCTCATTCTTTTGGATGAAAATTGA 681 0.4508 MDMEVSSALSIAKEEREKKLGKTDTEADLHCSLLQHCNITHMEIIPKCFDGFASSSTKQPPTTIQELCHRFSLAQLRKATNNFDTNQLIGRAPFGETYRGCISIHDEPTQIAVKRLRAGGSSPGLSMYKNEILFMCQLRHPNLVSLIGFCDDKKELMAVYEYLPNGSLKNQHDRSGSHSRSPVLSWKKRLEISIGVGRGLHYLHAGTKRTIFHRDVKTTLILLDEN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0118 226 SUPERFAMILY Protein kinase-like (PK-like) 57 226 IPR011009 -
Dere01g0118 226 ProSiteProfiles Protein kinase domain profile. 83 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0118 226 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Dere01g0118 226 SMART tyrkin_6 83 226 IPR020635 GO:0004713|GO:0006468
Dere01g0118 226 Gene3D Transferase(Phosphotransferase) domain 1 163 226 - -
Dere01g0118 226 Pfam Protein tyrosine and serine/threonine kinase 86 226 IPR001245 GO:0004672|GO:0006468
Dere01g0118 226 FunFam receptor-like protein kinase FERONIA 49 162 - -
Dere01g0118 226 PANTHER OS07G0166700 PROTEIN 67 226 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0118 Dere-ChrDere01 4619928 4622079 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0118 51 226 Receptor kinase-like Gene Family AT5G38990 48.295 4.62e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0118 PK_Tyr_Ser-Thr 7.2e-21 CL0016