Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g0116 ATGGTTCTCTCAGAGATCAACTTGATCGAAGGGATAGTAAGACTATCATGGAGGAAGAGGCTCGATATCAGCATAGGAGTGGCGCGTGGATTACACTACCTTCATACAGGAACTAAGCGCACCATCTTCCGTCGTGATGTTAAACTAAGTAACATTCTTTTGGATGAGGATTGGGTTCCCAAACTCACAGATTTTGGGGTTTCTTCGAAGCGGCCCAAATATTCGTCAAAGCCAAAACCTATATTAGTGAATAATGTCGCAGAAGAATATGGATTAACAGCCCCAGAGGACGCTGCATGGGGTAGGCTCACAGATAAGTCTGACGTCTATTCTTTTGGAGTGGTTTTGTTAGAAATAGTATGTGGAAAGACGTTATTCCAAATTTTTGATGTAATTTGGGATAAGGAGGACGAGGATGTGAATCAGGGTGAACATGCTTTGTCATCAGTTTGGAATATAGCTAAAAAAGTAGGGGATTTTGCAGAAAAGGAAAATGCTGAGAAAATTATTGATCCAAGTGTGGTGAGAGAAATAGAACCAACGTGTTGGAAATTGTACATTGGCATTGTATTGAGATGCTTGAATCAAGATGCCAATGAGAGGCCAGCAATGGGCGAAGTGGAAGCGGAACTAGAGCGCCTGTTGGAATTTTTGCAGCAACATCATAATATTACTCAAATAGGAATCCTTCCCAAGTGCTTTGGTGGCTCTGCGTCAACTAAACAACCATCCACAACTATAGAATATCAATGCCCTCGCTTTCGGTTGCACAACTTCGAAAATCTACCAACAACTTTCACTCAACTCAACTACTTCGAAGAGGACCCTTTAGTGAGGCATACAGAGGAACGCACCATCTTCCACCGTGATGTGACAACGAATAACACTCTTTTAGATGAGAATTGGGCTCCCAAGATCACAGGTTTTGATCTTGCCGTAAAGGGACCAATATTTTCATCCAAGGCCCTAAAACCCATTGAGTTGGATACTATTGTAGGAGAAATAACGCCAGAGTGCTGGAAATTGTACATTCATATTGTAGAGATTTGCTTAAATGAAGATGCTAGTGAAAGGCCAGCCATGGGCAAAGTGTAG 1095 0.4201 MVLSEINLIEGIVRLSWRKRLDISIGVARGLHYLHTGTKRTIFRRDVKLSNILLDEDWVPKLTDFGVSSKRPKYSSKPKPILVNNVAEEYGLTAPEDAAWGRLTDKSDVYSFGVVLLEIVCGKTLFQIFDVIWDKEDEDVNQGEHALSSVWNIAKKVGDFAEKENAEKIIDPSVVREIEPTCWKLYIGIVLRCLNQDANERPAMGEVEAELERLLEFLQQHHNITQIGILPKCFGGSASTKQPSTTIEYQCPRFRLHNFENLPTTFTQLNYFEEDPLVRHTEERTIFHRDVTTNNTLLDENWAPKITGFDLAVKGPIFSSKALKPIELDTIVGEITPECWKLYIHIVEICLNEDASERPAMGKV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g0116 364 Pfam Protein kinase domain 21 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0116 364 SUPERFAMILY Protein kinase-like (PK-like) 13 208 IPR011009 -
Dere01g0116 364 PANTHER OS07G0166700 PROTEIN 280 316 IPR045272 GO:0004714|GO:0006468
Dere01g0116 364 SMART serkin_6 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0116 364 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g0116 364 SUPERFAMILY Protein kinase-like (PK-like) 283 361 IPR011009 -
Dere01g0116 364 Gene3D Transferase(Phosphotransferase) domain 1 8 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g0116 Dere-ChrDere01 4590624 4593583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g0116 14 216 Receptor kinase-like Gene Family AT2G39360 41.872 1.42e-37 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere01g0116 Pkinase 7.3e-20 CL0016